Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 21 229 XP_006715292 21 229 NP_775771 18 1935 XP_006720466 18 1935 XP_005254230 18 1935 XP_006720465 18 1935 XP_005254228 18 1935 NP_055816 17 2528 XP_006714833 17 4312 XP_006714394 17 4312 XP_005263325 17 4312 XP_005263324 17 4312 NP_057308 16 7355 XP_006720386 16 7355 XP_006720385 16 7355 XP_005268275 16 7355 XP_005267072 16 7355 NP_835488 15 9605 NP_073753 15 9605 NP_001073276 15 9605 NP_001073275 15 9605 NP_055039 15 9605 NP_056493 15 9605 NP_005384 15 9605 NP_004541 15 9605 NP_001156729 15 9605 NP_852469 15 9605 NP_005641 15 9605 NP_001159631 15 9605 XP_005276461 15 9605 XP_006725846 15 9605 XP_006725845 15 9605 XP_006725844 15 9605 XP_005277014 15 9605 XP_005277013 15 9605 XP_005277012 15 9605 XP_005261781 15 9605 XP_005261780 15 9605 XP_006724377 15 9605 XP_006724376 15 9605 XP_005261779 15 9605 XP_006719869 15 9605 XP_006719868 15 9605 XP_005266408 15 9605 XP_005266407 15 9605 XP_005266403 15 9605 XP_006719867 15 9605 XP_006719866 15 9605 XP_005266405 15 9605 XP_005266404 15 9605 XP_005265461 15 9605 XP_005245265 15 9605>NP_115927 Length = 1321 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNVAGFRG 8 RNVAGFRG Sbjct: 194 RNVAGFRG 201>XP_006715292 Length = 759 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RNVAGFRG 8 RNVAGFRG Sbjct: 181 RNVAGFRG 188>NP_775771 Length = 1244 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R VAGFRG Sbjct: 181 RAVAGFRG 188>XP_006720466 Length = 1175 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R VAGFRG Sbjct: 112 RAVAGFRG 119>XP_005254230 Length = 1175 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R VAGFRG Sbjct: 112 RAVAGFRG 119>XP_006720465 Length = 1239 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R VAGFRG Sbjct: 176 RAVAGFRG 183>XP_005254228 Length = 1250 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R VAGFRG Sbjct: 187 RAVAGFRG 194>NP_055816 Length = 3664 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R V+GFRG Sbjct: 102 REVSGFRG 109>XP_006714833 Length = 774 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RNVAGFRGM 9 R++AG+RG+ Sbjct: 766 RSLAGWRGL 774>XP_006714394 Length = 960 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R V+GFRG Sbjct: 24 RPVSGFRG 31>XP_005263325 Length = 970 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R V+GFRG Sbjct: 24 RPVSGFRG 31>XP_005263324 Length = 1004 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNVAGFRG 8 R V+GFRG Sbjct: 24 RPVSGFRG 31>NP_057308 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 RN+ G RG+ Sbjct: 43 RNIKGERGL 51>XP_006720386 Length = 1571 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NVAGFRG 8 NVA FRG Sbjct: 257 NVATFRG 263>XP_006720385 Length = 1683 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NVAGFRG 8 NVA FRG Sbjct: 257 NVATFRG 263>XP_005268275 Length = 1684 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 NVAGFRG 8 NVA FRG Sbjct: 261 NVATFRG 267>XP_005267072 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 RN+ G RG+ Sbjct: 36 RNIKGERGL 44>NP_835488 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 204 RNVSGF 209>NP_073753 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 204 RNVSGF 209>NP_001073276 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VAGFRGM 9 ++GF+GM Sbjct: 345 ISGFQGM 351>NP_001073275 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VAGFRGM 9 ++GF+GM Sbjct: 345 ISGFQGM 351>NP_055039 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VAGFRGM 9 ++GF+GM Sbjct: 345 ISGFQGM 351>NP_056493 Length = 2946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>NP_005384 Length = 1909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 RN+ FRG+ Sbjct: 706 RNLQHFRGL 714>NP_004541 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 R + GFRG+ Sbjct: 5 RALCGFRGV 13>NP_001156729 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 RN+ FRG+ Sbjct: 729 RNLQHFRGL 737>NP_852469 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>NP_005641 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>NP_001159631 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 R + GFRG+ Sbjct: 5 RALCGFRGV 13>XP_005276461 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VAGFRGM 9 ++GF+GM Sbjct: 345 ISGFQGM 351>XP_006725846 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_006725845 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_006725844 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_005277014 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_005277013 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_005277012 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_005261781 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_005261780 Length = 1949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_006724377 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_006724376 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_005261779 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 719 RNVSGF 724>XP_006719869 Length = 2943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719868 Length = 2938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266408 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266407 Length = 2641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 980 GFRGM 984>XP_005266403 Length = 2941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719867 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_006719866 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266405 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_005266404 Length = 2967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GFRGM 9 GFRGM Sbjct: 1306 GFRGM 1310>XP_005265461 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNVAGF 6 RNV+GF Sbjct: 138 RNVSGF 143>XP_005245265 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNVAGFRGM 9 R + GFRG+ Sbjct: 5 RALCGFRGV 13Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.148 0.456 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,269 Number of extensions: 808 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |