Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004110                                                              20     299
NP_001001920                                                           18    1935
NP_059135                                                              17    3301
XP_005250507                                                           17    3301
XP_005250506                                                           17    3301
XP_005250503                                                           17    3301
NP_005791                                                              17    4312
NP_071332                                                              17    4312
XP_005266271                                                           17    4312
XP_006719814                                                           17    4312
XP_005266270                                                           17    4312
NP_008840                                                              16    5631
NP_000799                                                              16    5631
NP_000798                                                              16    5631
NP_001273756                                                           16    5631
NP_001107647                                                           16    5631
NP_000801                                                              16    5631
NP_000797                                                              16    5631
XP_006724874                                                           16    5631
XP_005274716                                                           16    5631
XP_005268315                                                           16    5631
XP_006720522                                                           16    5631
XP_005248622                                                           16    5631
XP_005248621                                                           16    5631
XP_006714729                                                           16    5631
XP_006714728                                                           16    5631
XP_005248137                                                           16    5631
XP_006714065                                                           16    5631
NP_001121115                                                           16    5631
NP_001121116                                                           16    5631
NP_001121117                                                           16    5631
NP_001121120                                                           16    5631
NP_001005276                                                           16    5631
NP_001158509                                                           16    5631
NP_001094383                                                           16    7355
NP_056012                                                              16    7355
NP_055513                                                              16    7355
NP_001230056                                                           16    7355
NP_055524                                                              16    7355
NP_064583                                                              16    7355
XP_005257584                                                           16    7355
XP_006720155                                                           16    7355
XP_006720154                                                           16    7355
XP_006720153                                                           16    7355
XP_006720152                                                           16    7355
XP_006720151                                                           16    7355
XP_006720150                                                           16    7355
XP_005267520                                                           16    7355
XP_006720149                                                           16    7355
XP_005267519                                                           16    7355
XP_006720148                                                           16    7355
XP_006711904                                                           16    7355
NP_005735                                                              16    7355
NP_036218                                                              15    9605
NP_002541                                                              15    9605
NP_940948                                                              15    9605
NP_001242940                                                           15    9605
NP_001191195                                                           15    9605
NP_653271                                                              15    9605
NP_001264890                                                           15    9605
NP_001191196                                                           15    9605
NP_000800                                                              15    9605
NP_001264891                                                           15    9605
NP_055426                                                              15    9605
NP_001242939                                                           15    9605
NP_001269353                                                           15    9605
NP_056538                                                              15    9605
NP_001242938                                                           15    9605
NP_001242937                                                           15    9605
NP_001242936                                                           15    9605
NP_699197                                                              15    9605
NP_068742                                                              15    9605
NP_001004356                                                           15    9605
NP_003147                                                              15    9605
XP_005268698                                                           15    9605
XP_005250453                                                           15    9605
XP_006715467                                                           15    9605
XP_006714066                                                           15    9605
XP_005247022                                                           15    9605
NP_003766                                                              15    9605
NP_001001921                                                           15    9605
NP_000802                                                              15    9605
NP_001004358                                                           15    9605
NP_001004693                                                           15    9605
NP_001001954                                                           15    9605
NP_001004134                                                           15    9605
>NP_004110
          Length = 993

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RNTLLYTFR 9
           RNTLLYT R
Sbjct: 161 RNTLLYTLR 169
>NP_001001920
          Length = 370

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N L+YTFR
Sbjct: 336 NPLIYTFR 343
>NP_059135
          Length = 854

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RNTLLYTF 8
          +N LLYTF
Sbjct: 79 QNELLYTF 86
>XP_005250507
          Length = 520

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RNTLLYTF 8
          +N LLYTF
Sbjct: 79 QNELLYTF 86
>XP_005250506
          Length = 524

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RNTLLYTF 8
          +N LLYTF
Sbjct: 79 QNELLYTF 86
>XP_005250503
          Length = 806

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RNTLLYTF 8
          +N LLYTF
Sbjct: 79 QNELLYTF 86
>NP_005791
          Length = 1092

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   NTLLYT 7
           NTLLYT
Sbjct: 277 NTLLYT 282
>NP_071332
          Length = 384

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N LLYT+R
Sbjct: 332 NPLLYTWR 339
>XP_005266271
          Length = 911

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   NTLLYT 7
           NTLLYT
Sbjct: 96  NTLLYT 101
>XP_006719814
          Length = 1086

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   NTLLYT 7
           NTLLYT
Sbjct: 271 NTLLYT 276
>XP_005266270
          Length = 1092

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   NTLLYT 7
           NTLLYT
Sbjct: 277 NTLLYT 282
>NP_008840
          Length = 1237

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT L+T+R
Sbjct: 663 NTFLHTYR 670
>NP_000799
          Length = 492

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 178 TLLYTMR 184
>NP_000798
          Length = 451

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_001273756
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 98  TLLYTMR 104
>NP_001107647
          Length = 451

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_000801
          Length = 462

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 160 TLLYTMR 166
>NP_000797
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>XP_006724874
          Length = 340

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 178 TLLYTMR 184
>XP_005274716
          Length = 491

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 178 TLLYTMR 184
>XP_005268315
          Length = 462

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 160 TLLYTMR 166
>XP_006720522
          Length = 462

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 160 TLLYTMR 166
>XP_005248622
          Length = 937

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT L+T+R
Sbjct: 663 NTFLHTYR 670
>XP_005248621
          Length = 1165

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT L+T+R
Sbjct: 663 NTFLHTYR 670
>XP_006714729
          Length = 1214

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT L+T+R
Sbjct: 663 NTFLHTYR 670
>XP_006714728
          Length = 1235

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT L+T+R
Sbjct: 661 NTFLHTYR 668
>XP_005248137
          Length = 396

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 98  TLLYTMR 104
>XP_006714065
          Length = 451

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_001121115
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_001121116
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_001121117
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_001121120
          Length = 456

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 153 TLLYTMR 159
>NP_001005276
          Length = 323

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N+L+YT R
Sbjct: 285 NSLIYTLR 292
>NP_001158509
          Length = 462

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           TLLYT R
Sbjct: 160 TLLYTMR 166
>NP_001094383
          Length = 904

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 788 KNTLKCTFR 796
>NP_056012
          Length = 889

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 773 KNTLKCTFR 781
>NP_055513
          Length = 807

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   LLYTFR 9
           +LYTFR
Sbjct: 579 ILYTFR 584
>NP_001230056
          Length = 814

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 698 KNTLKCTFR 706
>NP_055524
          Length = 3546

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    NTLLYTF 8
            NT+ YTF
Sbjct: 2087 NTMRYTF 2093
>NP_064583
          Length = 483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RNTLLYTF 8
           + TLL+TF
Sbjct: 356 KRTLLFTF 363
>XP_005257584
          Length = 483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RNTLLYTF 8
           + TLL+TF
Sbjct: 356 KRTLLFTF 363
>XP_006720155
          Length = 881

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 765 KNTLKCTFR 773
>XP_006720154
          Length = 894

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 778 KNTLKCTFR 786
>XP_006720153
          Length = 905

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 789 KNTLKCTFR 797
>XP_006720152
          Length = 911

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 774 KNTLKCTFR 782
>XP_006720151
          Length = 915

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 778 KNTLKCTFR 786
>XP_006720150
          Length = 918

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 781 KNTLKCTFR 789
>XP_005267520
          Length = 921

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 784 KNTLKCTFR 792
>XP_006720149
          Length = 922

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 785 KNTLKCTFR 793
>XP_005267519
          Length = 925

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 788 KNTLKCTFR 796
>XP_006720148
          Length = 926

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RNTLLYTFR 9
           +NTL  TFR
Sbjct: 789 KNTLKCTFR 797
>XP_006711904
          Length = 630

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   LLYTFR 9
           +LYTFR
Sbjct: 402 ILYTFR 407
>NP_005735
          Length = 557

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RNTLLYTF 8
           R TL+YT+
Sbjct: 469 RATLMYTY 476
>NP_036218
          Length = 886

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TLLYTF 8
           TLLYT+
Sbjct: 878 TLLYTY 883
>NP_002541
          Length = 315

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 289 NPIIYSFR 296
>NP_940948
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  RNTLLYT 7
          RNT +YT
Sbjct: 4  RNTQMYT 10
>NP_001242940
          Length = 682

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 568 RNTVTYT 574
>NP_001191195
          Length = 535

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           T+LYT R
Sbjct: 140 TILYTMR 146
>NP_653271
          Length = 1454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1    RNTLLYTF 8
            +NT  YTF
Sbjct: 1410 KNTQTYTF 1417
>NP_001264890
          Length = 791

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   RNTLLYTF 8
           RNTL  TF
Sbjct: 387 RNTLFGTF 394
>NP_001191196
          Length = 484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           T+LYT R
Sbjct: 140 TILYTMR 146
>NP_000800
          Length = 554

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           T+LYT R
Sbjct: 159 TILYTMR 165
>NP_001264891
          Length = 540

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   RNTLLYTF 8
           RNTL  TF
Sbjct: 387 RNTLFGTF 394
>NP_055426
          Length = 5596

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   NTLLYTF 8
           NTLL+ F
Sbjct: 812 NTLLFAF 818
>NP_001242939
          Length = 682

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 568 RNTVTYT 574
>NP_001269353
          Length = 963

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   RNTLLYTF 8
           +NT  YTF
Sbjct: 919 KNTQTYTF 926
>NP_056538
          Length = 782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 668 RNTVTYT 674
>NP_001242938
          Length = 720

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 606 RNTVTYT 612
>NP_001242937
          Length = 782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 668 RNTVTYT 674
>NP_001242936
          Length = 782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 668 RNTVTYT 674
>NP_699197
          Length = 3571

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    RNTLLYT 7
            RNT+ YT
Sbjct: 1982 RNTVTYT 1988
>NP_068742
          Length = 504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT+ Y+FR
Sbjct: 342 NTMGYSFR 349
>NP_001004356
          Length = 504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT+ Y+FR
Sbjct: 342 NTMGYSFR 349
>NP_003147
          Length = 685

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   RNTLLYTF 8
           RNTL  TF
Sbjct: 387 RNTLFGTF 394
>XP_005268698
          Length = 321

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 291 NPIIYSFR 298
>XP_005250453
          Length = 720

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   RNTLLYT 7
           RNT+ YT
Sbjct: 606 RNTVTYT 612
>XP_006715467
          Length = 5550

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   NTLLYTF 8
           NTLL+ F
Sbjct: 812 NTLLFAF 818
>XP_006714066
          Length = 544

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           T+LYT R
Sbjct: 149 TILYTMR 155
>XP_005247022
          Length = 494

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TLLYTF 8
           TLLYT+
Sbjct: 486 TLLYTY 491
>NP_003766
          Length = 384

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 303 NPIIYSFR 310
>NP_001001921
          Length = 324

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 286 NPIIYSFR 293
>NP_000802
          Length = 453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TLLYTFR 9
           T+LYT R
Sbjct: 143 TILYTMR 149
>NP_001004358
          Length = 504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           NT+ Y+FR
Sbjct: 342 NTMGYSFR 349
>NP_001004693
          Length = 312

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 286 NPIIYSFR 293
>NP_001001954
          Length = 324

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 287 NPIIYSFR 294
>NP_001004134
          Length = 317

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   NTLLYTFR 9
           N ++Y+FR
Sbjct: 287 NPIIYSFR 294
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.340    0.147    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 430,773
Number of extensions: 776
Number of successful extensions: 86
Number of sequences better than 10000.0: 86
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 86
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.5 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package