Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 20 509 NP_001263689 20 509 NP_001119584 20 509 NP_001119586 20 509 NP_001263625 20 509 NP_001119590 20 509 NP_001263690 20 509 NP_001119585 20 509 NP_001263624 20 509 NP_001119588 20 509 NP_001119587 20 509 NP_001119589 20 509 NP_001263627 20 509 NP_001263628 20 509 NP_001263626 20 509 NP_001190174 17 3301 NP_001005 17 3301 NP_001191020 17 3301 NP_001189399 17 3301 NP_055797 17 4312 XP_005267484 17 4312 XP_005267481 17 4312 XP_005267480 17 4312 XP_005267479 17 4312 XP_005267478 17 4312 XP_005267477 17 4312 NP_001127965 17 4312 NP_689818 16 5631 XP_006723134 16 5631 XP_006723133 16 5631 XP_006723132 16 5631 XP_006723131 16 5631 XP_006723130 16 5631 XP_006723129 16 5631 NP_004360 16 7355 NP_476508 16 7355 NP_476507 16 7355 NP_005804 16 7355 NP_002733 16 7355 NP_001073351 16 7355 NP_001073350 16 7355 NP_001073349 16 7355 NP_057541 16 7355 NP_001191443 16 7355 XP_005258773 16 7355 XP_005267916 16 7355 XP_005246123 16 7355 XP_005246122 16 7355 XP_006712316 16 7355 XP_006712043 16 7355 XP_006712042 16 7355 XP_006712041 16 7355 XP_005264295 16 7355 XP_005264294 16 7355 NP_009052 15 9605 NP_694972 15 9605 NP_001010848 15 9605 NP_005968 15 9605 NP_001159444 15 9605 NP_001159445 15 9605 NP_001123553 15 9605 NP_689417 15 9605 NP_002653 15 9605 NP_898865 15 9605 NP_898864 15 9605 XP_006720248 15 9605 XP_005267848 15 9605 XP_006719917 15 9605 XP_005266543 15 9605 XP_005266542 15 9605 XP_005269501 15 9605 XP_005247591 15 9605 XP_005247590 15 9605 NP_060413 15 9605>NP_000537 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 209 RNTFRHSVV 217>NP_001263689 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 170 RNTFRHSVV 178>NP_001119584 Length = 393 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 209 RNTFRHSVV 217>NP_001119586 Length = 341 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 209 RNTFRHSVV 217>NP_001263625 Length = 302 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 170 RNTFRHSVV 178>NP_001119590 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 170 RNTFRHSVV 178>NP_001263690 Length = 354 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 170 RNTFRHSVV 178>NP_001119585 Length = 346 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 209 RNTFRHSVV 217>NP_001263624 Length = 307 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 170 RNTFRHSVV 178>NP_001119588 Length = 209 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 77 RNTFRHSVV 85>NP_001119587 Length = 261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 77 RNTFRHSVV 85>NP_001119589 Length = 214 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 77 RNTFRHSVV 85>NP_001263627 Length = 182 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 50 RNTFRHSVV 58>NP_001263628 Length = 187 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 50 RNTFRHSVV 58>NP_001263626 Length = 234 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RNTFR SVV Sbjct: 50 RNTFRHSVV 58>NP_001190174 Length = 165 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 R+T+RRS V Sbjct: 124 RDTYRRSAV 132>NP_001005 Length = 165 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 R+T+RRS V Sbjct: 124 RDTYRRSAV 132>NP_001191020 Length = 165 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 R+T+RRS V Sbjct: 124 RDTYRRSAV 132>NP_001189399 Length = 291 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 R+T+RRS V Sbjct: 124 RDTYRRSAV 132>NP_055797 Length = 2341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 785 RSTFRRQAV 793>XP_005267484 Length = 1515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 785 RSTFRRQAV 793>XP_005267481 Length = 2293 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 729 RSTFRRQAV 737>XP_005267480 Length = 2336 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 785 RSTFRRQAV 793>XP_005267479 Length = 2344 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 785 RSTFRRQAV 793>XP_005267478 Length = 2348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 784 RSTFRRQAV 792>XP_005267477 Length = 2349 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 785 RSTFRRQAV 793>NP_001127965 Length = 74 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNTFRRSVV 9 RN FRR+++ Sbjct: 38 RNDFRRNLI 46>NP_689818 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>XP_006723134 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>XP_006723133 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>XP_006723132 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>XP_006723131 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>XP_006723130 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>XP_006723129 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 R TFRRS Sbjct: 95 RKTFRRS 101>NP_004360 Length = 3177 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RNTF+R Sbjct: 2496 RNTFKR 2501>NP_476508 Length = 2971 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RNTF+R Sbjct: 2290 RNTFKR 2295>NP_476507 Length = 2570 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RNTF+R Sbjct: 1889 RNTFKR 1894>NP_005804 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 731 SFRRSVV 737>NP_002733 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 738 SFRRSVV 744>NP_001073351 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 549 SFRRSVV 555>NP_001073350 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 706 SFRRSVV 712>NP_001073349 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 706 SFRRSVV 712>NP_057541 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 706 SFRRSVV 712>NP_001191443 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTFRRSV 8 NT+RRS+ Sbjct: 7 NTYRRSL 13>XP_005258773 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 549 SFRRSVV 555>XP_005267916 Length = 920 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 746 SFRRSVV 752>XP_005246123 Length = 2770 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RNTF+R Sbjct: 2089 RNTFKR 2094>XP_005246122 Length = 2977 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RNTF+R Sbjct: 2296 RNTFKR 2301>XP_006712316 Length = 3010 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RNTF+R Sbjct: 2329 RNTFKR 2334>XP_006712043 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 472 SFRRSVV 478>XP_006712042 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 558 SFRRSVV 564>XP_006712041 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 558 SFRRSVV 564>XP_005264295 Length = 786 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 627 SFRRSVV 633>XP_005264294 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TFRRSVV 9 +FRRSVV Sbjct: 731 SFRRSVV 737>NP_009052 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FRRSVV 9 FRRSVV Sbjct: 111 FRRSVV 116>NP_694972 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RNTFRR 6 RN+FRR Sbjct: 42 RNSFRR 47>NP_001010848 Length = 696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 RN FRR+ Sbjct: 488 RNAFRRT 494>NP_005968 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFRRS 7 NTFRR+ Sbjct: 115 NTFRRT 120>NP_001159444 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 RN FRR+ Sbjct: 487 RNAFRRT 493>NP_001159445 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 RN FRR+ Sbjct: 267 RNAFRRT 273>NP_001123553 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 145 RHTFRRQNV 153>NP_689417 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTFRRSV 8 N+FRR+V Sbjct: 306 NSFRRNV 312>NP_002653 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 145 RHTFRRQNV 153>NP_898865 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFRRS 7 NTFRR+ Sbjct: 115 NTFRRT 120>NP_898864 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFRRS 7 NTFRR+ Sbjct: 115 NTFRRT 120>XP_006720248 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTFRRSV 8 N+FRR+V Sbjct: 306 NSFRRNV 312>XP_005267848 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTFRRSV 8 N+FRR+V Sbjct: 306 NSFRRNV 312>XP_006719917 Length = 142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFRRS 7 NTFRR+ Sbjct: 115 NTFRRT 120>XP_005266543 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFRRS 7 NTFRR+ Sbjct: 115 NTFRRT 120>XP_005266542 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NTFRRS 7 NTFRR+ Sbjct: 115 NTFRRT 120>XP_005269501 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RNTFRRS 7 RN FRR+ Sbjct: 488 RNAFRRT 494>XP_005247591 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 145 RHTFRRQNV 153>XP_005247590 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNTFRRSVV 9 R+TFRR V Sbjct: 145 RHTFRRQNV 153>NP_060413 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NTFRRSV 8 N+FRR+V Sbjct: 306 NSFRRNV 312Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.138 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,061 Number of extensions: 580 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |