Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 XP_006726609 17 4312 XP_006719787 17 4312 XP_006710027 17 4312 NP_114480 16 5631 NP_055426 16 5631 NP_114481 16 5631 NP_061737 16 5631 XP_005248757 16 5631 XP_006715468 16 5631 XP_005248756 16 5631 XP_006715467 16 5631 NP_060247 16 7355 NP_003639 16 7355 NP_690618 16 7355 XP_006722027 16 7355 XP_005257541 16 7355 XP_005257540 16 7355 XP_005257539 16 7355 XP_005246167 16 7355 XP_005246166 16 7355 XP_005246165 16 7355 XP_005246164 16 7355 NP_054733 15 9605 NP_004435 15 9605 NP_001185761 15 9605 NP_071754 15 9605 NP_001185763 15 9605 NP_001002810 15 9605 NP_055459 15 9605 NP_001182189 15 9605 NP_001002812 15 9605 NP_001182190 15 9605 XP_006711719 15 9605 XP_006711717 15 9605 XP_006711716 15 9605 XP_006711715 15 9605 XP_006711714 15 9605 XP_006711713 15 9605 XP_006711710 15 9605 XP_006711709 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNLELRVLL 9 RNLEL+VLL Sbjct: 3294 RNLELQVLL 3302>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNLELRVLL 9 RNLEL+VLL Sbjct: 3286 RNLELQVLL 3294>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNLELRVLL 9 RNLEL+VLL Sbjct: 3247 RNLELQVLL 3255>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNLELRVLL 9 RNLEL+VLL Sbjct: 3326 RNLELQVLL 3334>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNLELRVLL 9 RNLEL+VLL Sbjct: 3339 RNLELQVLL 3347>XP_006726609 Length = 2838 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNLELRVL 8 RNLE R+L Sbjct: 2175 RNLEARIL 2182>XP_006719787 Length = 2838 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNLELRVL 8 RNLE R+L Sbjct: 2175 RNLEARIL 2182>XP_006710027 Length = 2837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNLELRVL 8 RNLE R+L Sbjct: 2174 RNLEARIL 2181>NP_114480 Length = 837 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNLELRVL 8 R+LELRV+ Sbjct: 527 RDLELRVI 534>NP_055426 Length = 5596 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLELRVLL 9 NL+L+VLL Sbjct: 2323 NLDLKVLL 2330>NP_114481 Length = 750 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNLELRVL 8 R+LELRV+ Sbjct: 527 RDLELRVI 534>NP_061737 Length = 935 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNLELRVL 8 R+LELRV+ Sbjct: 527 RDLELRVI 534>XP_005248757 Length = 3591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLELRVLL 9 NL+L+VLL Sbjct: 318 NLDLKVLL 325>XP_006715468 Length = 3744 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLELRVLL 9 NL+L+VLL Sbjct: 471 NLDLKVLL 478>XP_005248756 Length = 3905 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLELRVLL 9 NL+L+VLL Sbjct: 632 NLDLKVLL 639>XP_006715467 Length = 5550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NLELRVLL 9 NL+L+VLL Sbjct: 2323 NLDLKVLL 2330>NP_060247 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNLELRVLL 9 RNL LRV L Sbjct: 22 RNLRLRVHL 30>NP_003639 Length = 1170 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLE +VLL Sbjct: 771 KNLEQKVLL 779>NP_690618 Length = 1214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLE +VLL Sbjct: 815 KNLEQKVLL 823>XP_006722027 Length = 457 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNLELRVLL 9 RNL LRV L Sbjct: 22 RNLRLRVHL 30>XP_005257541 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNLELRVLL 9 RNL LRV L Sbjct: 22 RNLRLRVHL 30>XP_005257540 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNLELRVLL 9 RNL LRV L Sbjct: 22 RNLRLRVHL 30>XP_005257539 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RNLELRVLL 9 RNL LRV L Sbjct: 22 RNLRLRVHL 30>XP_005246167 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLE +VLL Sbjct: 281 KNLEQKVLL 289>XP_005246166 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLE +VLL Sbjct: 815 KNLEQKVLL 823>XP_005246165 Length = 1081 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLE +VLL Sbjct: 682 KNLEQKVLL 690>XP_005246164 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLE +VLL Sbjct: 703 KNLEQKVLL 711>NP_054733 Length = 2136 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNLELRVLL 9 +NLEL+ LL Sbjct: 770 KNLELKDLL 778>NP_004435 Length = 987 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LELRVLL 9 +ELRVLL Sbjct: 1 MELRVLL 7>NP_001185761 Length = 2240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 113 RNIELKV 119>NP_071754 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 184 RNIELKV 190>NP_001185763 Length = 2362 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 47 RNIELKV 53>NP_001002810 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 47 RNIELKV 53>NP_055459 Length = 2346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 47 RNIELKV 53>NP_001182189 Length = 141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 15 RNIELKV 21>NP_001002812 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 47 RNIELKV 53>NP_001182190 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 50 RNIELKV 56>XP_006711719 Length = 2302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 113 RNIELKV 119>XP_006711717 Length = 2385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 113 RNIELKV 119>XP_006711716 Length = 2411 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 113 RNIELKV 119>XP_006711715 Length = 2428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 47 RNIELKV 53>XP_006711714 Length = 2429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 47 RNIELKV 53>XP_006711713 Length = 2432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 50 RNIELKV 56>XP_006711710 Length = 2494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 113 RNIELKV 119>XP_006711709 Length = 2495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNLELRV 7 RN+EL+V Sbjct: 113 RNIELKV 119Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.156 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 370,213 Number of extensions: 400 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |