Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1482 NP_071754 18 1482 NP_001185763 18 1482 NP_001002810 18 1482 NP_055459 18 1482 NP_001182189 18 1482 NP_001002812 18 1482 NP_001182190 18 1482 XP_006711719 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 NP_004953 17 4312 XP_006717825 17 4312 NP_004841 16 5631 NP_056386 16 5631 NP_008893 16 5631 NP_001171570 16 5631 NP_001007089 16 5631 XP_006715520 16 5631 XP_005246247 16 5631 NP_001093879 16 5631 NP_005742 16 7355 NP_671714 16 7355 NP_001248770 16 7355 XP_006723569 16 7355 XP_005259486 16 7355 XP_005255642 16 7355 XP_006715890 16 7355 XP_005250160 16 7355 XP_005250159 16 7355 NP_001098719 16 7355 NP_001098718 16 7355 NP_079056 16 7355 NP_001074001 16 7355 NP_001073926 16 7355 NP_000811 15 9605 NP_001137417 15 9605 NP_001137418 15 9605 NP_001120670 15 9605 NP_009198 15 9605 NP_001192 15 9605 XP_005257055 15 9605 XP_005257053 15 9605 XP_005257052 15 9605 XP_006714354 15 9605>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 113 RNIELKVEV 121>NP_071754 Length = 310 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 184 RNIELKVEV 192>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 47 RNIELKVEV 55>NP_001002810 Length = 173 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 47 RNIELKVEV 55>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 47 RNIELKVEV 55>NP_001182189 Length = 141 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 15 RNIELKVEV 23>NP_001002812 Length = 969 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 47 RNIELKVEV 55>NP_001182190 Length = 176 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 50 RNIELKVEV 58>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 113 RNIELKVEV 121>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 113 RNIELKVEV 121>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 113 RNIELKVEV 121>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 47 RNIELKVEV 55>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 47 RNIELKVEV 55>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 50 RNIELKVEV 58>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 113 RNIELKVEV 121>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RNI LKVEV Sbjct: 113 RNIELKVEV 121>NP_004953 Length = 478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 RN+VLKV Sbjct: 460 RNVVLKV 466>XP_006717825 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 RN+VLKV Sbjct: 459 RNVVLKV 465>NP_004841 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNIVLKVE 8 RN+ LK+E Sbjct: 790 RNLTLKIE 797>NP_056386 Length = 1112 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RNI+LK++ Sbjct: 1072 RNIILKLQ 1079>NP_008893 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLKVEV 9 N++LK+EV Sbjct: 74 NLILKLEV 81>NP_001171570 Length = 639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLKVEV 9 N++LK+EV Sbjct: 74 NLILKLEV 81>NP_001007089 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIVLKVEV 9 N++LK+EV Sbjct: 55 NLILKLEV 62>XP_006715520 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RNI+LK++ Sbjct: 1016 RNIILKLQ 1023>XP_005246247 Length = 1417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNIVLKVE 8 RN+ LK+E Sbjct: 790 RNLTLKIE 797>NP_001093879 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RNI+LK++ Sbjct: 1065 RNIILKLQ 1072>NP_005742 Length = 3907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RN+V+K+E Sbjct: 3610 RNMVMKLE 3617>NP_671714 Length = 3899 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RN+V+K+E Sbjct: 3602 RNMVMKLE 3609>NP_001248770 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNIVLKVEV 9 RNI LK+ + Sbjct: 697 RNIFLKISI 705>XP_006723569 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 +N+V K+EV Sbjct: 119 KNLVRKIEV 127>XP_005259486 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 +N+V K+EV Sbjct: 119 KNLVRKIEV 127>XP_005255642 Length = 647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNIVLKVEV 9 RNI LK+ + Sbjct: 338 RNIFLKISI 346>XP_006715890 Length = 3860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RN+V+K+E Sbjct: 3563 RNMVMKLE 3570>XP_005250160 Length = 3939 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RN+V+K+E Sbjct: 3642 RNMVMKLE 3649>XP_005250159 Length = 3952 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RNIVLKVE 8 RN+V+K+E Sbjct: 3655 RNMVMKLE 3662>NP_001098719 Length = 948 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNIVLKVEV 9 RNI LK+ + Sbjct: 697 RNIFLKISI 705>NP_001098718 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNIVLKVEV 9 RNI LK+ + Sbjct: 697 RNIFLKISI 705>NP_079056 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNIVLKVEV 9 RNI LK+ + Sbjct: 451 RNIFLKISI 459>NP_001074001 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIVLKVE 8 +NIVLK E Sbjct: 82 KNIVLKFE 89>NP_001073926 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 +N+V K+EV Sbjct: 119 KNLVRKIEV 127>NP_000811 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 RN+V+KV Sbjct: 389 RNLVIKV 395>NP_001137417 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 RN+V+KV Sbjct: 116 RNLVIKV 122>NP_001137418 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 RN+V+KV Sbjct: 90 RNLVIKV 96>NP_001120670 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RN++LK+ + Sbjct: 512 RNLILKLAI 520>NP_009198 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RN++LK+ + Sbjct: 512 RNLILKLAI 520>NP_001192 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 +N+VLKV Sbjct: 454 KNVVLKV 460>XP_005257055 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RN++LK+ + Sbjct: 285 RNLILKLAI 293>XP_005257053 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RN++LK+ + Sbjct: 512 RNLILKLAI 520>XP_005257052 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RNIVLKVEV 9 RN++LK+ + Sbjct: 512 RNLILKLAI 520>XP_006714354 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RNIVLKV 7 +N+VLKV Sbjct: 421 KNVVLKV 427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.145 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 307,934 Number of extensions: 561 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |