Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 21 229 XP_005265800 21 229 XP_006714103 21 229 XP_006714102 21 229 NP_065681 18 1935 NP_066124 18 1935 NP_653267 18 1935 XP_006717999 18 1935 NP_002600 17 2528 XP_005268521 17 2528 NP_004068 17 3301 NP_036286 16 5631 NP_001158095 16 5631 NP_005498 16 5631 NP_004110 16 5631 NP_056505 16 5631 NP_001230242 16 5631 XP_006712484 16 5631 XP_006712483 16 5631 XP_005246521 16 5631 NP_057460 15 9605 NP_001276976 15 9605 NP_001276975 15 9605 NP_001244928 15 9605 NP_570897 15 9605 NP_001193945 15 9605 NP_003322 15 9605 NP_001155238 15 9605 NP_689837 15 9605 NP_776194 15 9605 NP_002840 15 9605 NP_001229306 15 9605 NP_001193944 15 9605 NP_000678 15 9605 NP_001191375 15 9605 NP_060817 15 9605 XP_006724141 15 9605 XP_005260374 15 9605 XP_005260373 15 9605 XP_006721607 15 9605 XP_005256736 15 9605 XP_005271971 15 9605 NP_001191376 15 9605>NP_006197 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RN+LLAQGK Sbjct: 822 RNVLLAQGK 830>XP_005265800 Length = 1089 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RN+LLAQGK Sbjct: 822 RNVLLAQGK 830>XP_006714103 Length = 1111 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RN+LLAQGK Sbjct: 844 RNVLLAQGK 852>XP_006714102 Length = 1114 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RN+LLAQGK Sbjct: 847 RNVLLAQGK 855>NP_065681 Length = 1072 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RNIL+A+G+ Sbjct: 878 RNILVAEGR 886>NP_066124 Length = 1114 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RNIL+A+G+ Sbjct: 878 RNILVAEGR 886>NP_653267 Length = 4753 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 RNI+ AQGK Sbjct: 3817 RNIVRAQGK 3825>XP_006717999 Length = 1207 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 RNILLAQGK 9 RNIL+A+G+ Sbjct: 971 RNILVAEGR 979>NP_002600 Length = 1106 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 RN+L+ +GK Sbjct: 830 RNVLICEGK 838>XP_005268521 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 RN+L+ +GK Sbjct: 766 RNVLICEGK 774>NP_004068 Length = 466 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NILLAQGK 9 N+LL QGK Sbjct: 386 NVLLEQGK 393>NP_036286 Length = 859 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NILLAQGK 9 NILL QG+ Sbjct: 576 NILLPQGR 583>NP_001158095 Length = 825 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NILLAQGK 9 NILL QG+ Sbjct: 576 NILLPQGR 583>NP_005498 Length = 166 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 +NI+L +GK Sbjct: 45 KNIILEEGK 53>NP_004110 Length = 993 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RNILLAQGK 9 RN+L+ GK Sbjct: 815 RNVLVTHGK 823>NP_056505 Length = 1315 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNILLAQG 8 +NILLA+G Sbjct: 129 QNILLAKG 136>NP_001230242 Length = 1294 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNILLAQG 8 +NILLA+G Sbjct: 129 QNILLAKG 136>XP_006712484 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNILLAQG 8 +NILLA+G Sbjct: 129 QNILLAKG 136>XP_006712483 Length = 1306 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNILLAQG 8 +NILLA+G Sbjct: 129 QNILLAKG 136>XP_005246521 Length = 1315 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RNILLAQG 8 +NILLA+G Sbjct: 129 QNILLAKG 136>NP_057460 Length = 1170 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNILLAQGK 9 RN+LLA K Sbjct: 924 RNLLLAGAK 932>NP_001276976 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LLAQGK 9 LLAQGK Sbjct: 384 LLAQGK 389>NP_001276975 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LLAQGK 9 LLAQGK Sbjct: 221 LLAQGK 226>NP_001244928 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNILLAQGK 9 RN+LLA K Sbjct: 965 RNLLLAGAK 973>NP_570897 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNILLAQG 8 RN++L QG Sbjct: 286 RNLVLKQG 293>NP_001193945 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNILLAQG 8 RN++L QG Sbjct: 325 RNLVLKQG 332>NP_003322 Length = 1187 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RNILLAQ 7 RNILLA+ Sbjct: 738 RNILLAR 744>NP_001155238 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 R ILLA+G+ Sbjct: 307 RIILLAEGR 315>NP_689837 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NILLAQG 8 N+LL QG Sbjct: 111 NVLLVQG 117>NP_776194 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNILLAQG 8 RNI LA+G Sbjct: 299 RNISLAKG 306>NP_002840 Length = 657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNILLAQG 8 RN++L QG Sbjct: 531 RNLVLKQG 538>NP_001229306 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NILLAQG 8 N+LL QG Sbjct: 111 NVLLVQG 117>NP_001193944 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNILLAQG 8 RN++L QG Sbjct: 419 RNLVLKQG 426>NP_000678 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 R ILLA+G+ Sbjct: 335 RIILLAEGR 343>NP_001191375 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NILLAQG 8 N+LLA+G Sbjct: 131 NLLLAEG 137>NP_060817 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NILLAQG 8 N+LLA+G Sbjct: 131 NLLLAEG 137>XP_006724141 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LLAQGK 9 LLAQGK Sbjct: 346 LLAQGK 351>XP_005260374 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 R ILLA+G+ Sbjct: 307 RIILLAEGR 315>XP_005260373 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RNILLAQGK 9 R ILLA+G+ Sbjct: 307 RIILLAEGR 315>XP_006721607 Length = 1130 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNILLAQGK 9 RN+LLA K Sbjct: 924 RNLLLAGAK 932>XP_005256736 Length = 1169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RNILLAQGK 9 RN+LLA K Sbjct: 923 RNLLLAGAK 931>XP_005271971 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NILLAQG 8 N+LL QG Sbjct: 111 NVLLVQG 117>NP_001191376 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NILLAQG 8 N+LLA+G Sbjct: 131 NLLLAEG 137Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.141 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,137 Number of extensions: 709 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |