Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 20 299 NP_570711 18 1482 NP_570712 18 1482 NP_570714 18 1482 NP_570713 18 1482 NP_570716 18 1482 NP_000235 18 1482 NP_570715 18 1482 XP_006718620 18 1482 XP_005274059 18 1482 XP_005274060 18 1482 XP_005274058 18 1482 NP_061159 17 4312 NP_001268885 17 4312 NP_061895 17 4312 XP_005266771 17 4312 XP_005254625 17 4312 XP_005254624 17 4312 NP_848563 16 5631 NP_085126 16 5631 NP_001136116 16 5631 NP_001001669 16 5631 XP_005262409 16 5631 XP_006717990 16 5631 XP_006717989 16 5631 XP_006714848 16 5631 XP_005268504 16 5631 XP_006714847 16 5631 XP_005246927 16 5631 XP_005246925 16 5631 XP_006712841 16 5631 XP_005246924 16 5631 XP_006712840 16 5631 NP_001182201 16 5631 NP_055935 16 7355 NP_036450 16 7355 NP_062535 16 7355 NP_005119 16 7355 XP_006724131 16 7355 XP_005267917 16 7355 XP_005248027 16 7355 XP_006713947 16 7355 NP_006099 15 9605 NP_001276049 15 9605 NP_001276048 15 9605 NP_001276050 15 9605 NP_000566 15 9605 NP_115602 15 9605 NP_004896 15 9605 NP_579920 15 9605 NP_579919 15 9605 NP_579918 15 9605 NP_579916 15 9605 NP_001265551 15 9605 XP_005276831 15 9605 XP_005251669 15 9605 XP_005251668 15 9605 XP_005251666 15 9605 XP_005251665 15 9605 XP_006712095 15 9605 XP_006712094 15 9605 XP_006712093 15 9605 XP_005264429 15 9605 NP_002864 15 9605 NP_579921 15 9605 NP_579922 15 9605 NP_579917 15 9605 NP_060022 15 9605 NP_001229267 15 9605>NP_000305 Length = 403 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 NIDDVVRF 9 NIDDVVRF Sbjct: 49 NIDDVVRF 56>NP_570711 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_570712 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_570714 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_570713 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_570716 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_000235 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_570715 Length = 615 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>XP_006718620 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>XP_005274059 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>XP_005274060 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>XP_005274058 Length = 610 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 R+IDDVVR Sbjct: 14 RSIDDVVR 21>NP_061159 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 RN+DD+ R Sbjct: 242 RNLDDMAR 249>NP_001268885 Length = 3631 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NIDDVVRF 9 N++DVV+F Sbjct: 2814 NLNDVVKF 2821>NP_061895 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RNIDDVVRF 9 +N++D+V+F Sbjct: 327 KNVEDMVQF 335>XP_005266771 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RNIDDVVRF 9 +N++D+V+F Sbjct: 186 KNVEDMVQF 194>XP_005254625 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 RN+DD+ R Sbjct: 242 RNLDDMAR 249>XP_005254624 Length = 1361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 RN+DD+ R Sbjct: 242 RNLDDMAR 249>NP_848563 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RNIDDVVRF 9 +NI D++RF Sbjct: 156 KNIKDLLRF 164>NP_085126 Length = 1671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1463 KNIPDVVR 1470>NP_001136116 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1463 KNIPDVVR 1470>NP_001001669 Length = 675 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+++ Sbjct: 74 NIDDIIK 80>XP_005262409 Length = 993 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVVRF 9 DDV+RF Sbjct: 15 DDVIRF 20>XP_006717990 Length = 175 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NIDDVV 7 NIDDVV Sbjct: 49 NIDDVV 54>XP_006717989 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 NIDDVV 7 NIDDVV Sbjct: 49 NIDDVV 54>XP_006714848 Length = 638 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+++ Sbjct: 74 NIDDIIK 80>XP_005268504 Length = 675 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+++ Sbjct: 74 NIDDIIK 80>XP_006714847 Length = 675 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+++ Sbjct: 74 NIDDIIK 80>XP_005246927 Length = 1683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1446 KNIPDVVR 1453>XP_005246925 Length = 1696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1459 KNIPDVVR 1466>XP_006712841 Length = 1696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1488 KNIPDVVR 1495>XP_005246924 Length = 1713 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1476 KNIPDVVR 1483>XP_006712840 Length = 1725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 +NI DVVR Sbjct: 1488 KNIPDVVR 1495>NP_001182201 Length = 993 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 DDVVRF 9 DDV+RF Sbjct: 15 DDVIRF 20>NP_055935 Length = 4169 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NIDDVV 7 N+DDVV Sbjct: 37 NVDDVV 42>NP_036450 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+V+ Sbjct: 684 NIDDLVK 690>NP_062535 Length = 2146 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +N+DD+++ Sbjct: 1817 KNVDDILK 1824>NP_005119 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +N+DD+V+ Sbjct: 1547 KNLDDLVK 1554>XP_006724131 Length = 2298 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +N+DD+V+ Sbjct: 1547 KNLDDLVK 1554>XP_005267917 Length = 2061 Score = 15.8 bits (29), Expect = 7355 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +N+DD+++ Sbjct: 1817 KNVDDILK 1824>XP_005248027 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+V+ Sbjct: 379 NIDDLVK 385>XP_006713947 Length = 738 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 NIDDVVR 8 NIDD+V+ Sbjct: 683 NIDDLVK 689>NP_006099 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 NIDDVV 7 N+DD+V Sbjct: 421 NVDDIV 426>NP_001276049 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>NP_001276048 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>NP_001276050 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>NP_000566 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 NIDDVVRF 9 N+D+ V+F Sbjct: 159 NLDEAVKF 166>NP_115602 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>NP_004896 Length = 224 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RNIDDVVR 8 RN D+++R Sbjct: 155 RNFDEILR 162>NP_579920 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 453 IDDIVR 458>NP_579919 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 367 IDDIVR 372>NP_579918 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 288 IDDIVR 293>NP_579916 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 453 IDDIVR 458>NP_001265551 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 453 IDDIVR 458>XP_005276831 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 288 IDDIVR 293>XP_005251669 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>XP_005251668 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>XP_005251666 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>XP_005251665 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RNIDDVVR 8 +++DDV+R Sbjct: 43 QDLDDVIR 50>XP_006712095 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NIDDVVRF 9 NID VRF Sbjct: 406 NIDKSVRF 413>XP_006712094 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NIDDVVRF 9 NID VRF Sbjct: 406 NIDKSVRF 413>XP_006712093 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NIDDVVRF 9 NID VRF Sbjct: 406 NIDKSVRF 413>XP_005264429 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NIDDVVRF 9 NID VRF Sbjct: 406 NIDKSVRF 413>NP_002864 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 453 IDDIVR 458>NP_579921 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 453 IDDIVR 458>NP_579922 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 453 IDDIVR 458>NP_579917 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDDVVR 8 IDD+VR Sbjct: 464 IDDIVR 469>NP_060022 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NIDDVVRF 9 NID VRF Sbjct: 392 NIDKSVRF 399>NP_001229267 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NIDDVVRF 9 NID VRF Sbjct: 392 NIDKSVRF 399Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.156 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,889 Number of extensions: 636 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |