Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 21 229 NP_001271427 16 5631 NP_689559 16 5631 NP_001271428 16 5631 NP_114401 16 5631 XP_006721509 16 5631 XP_006721508 16 5631 XP_006721507 16 5631 NP_065962 16 7355 XP_005250744 16 7355 XP_005250743 16 7355 XP_006716234 16 7355 XP_006712302 16 7355 XP_006712301 16 7355 XP_006712300 16 7355 XP_006712299 16 7355 XP_006712298 16 7355 XP_006712297 16 7355 NP_001099013 16 7355 NP_055853 16 7355 NP_001004725 16 7355 NP_861440 16 7355 NP_116107 15 9605 NP_001230199 15 9605 NP_055176 15 9605 NP_001076441 15 9605 NP_001230200 15 9605 NP_115618 15 9605 XP_006719164 15 9605 XP_005253463 15 9605 XP_006713726 15 9605 XP_005264089 15 9605 NP_067015 15 9605>NP_002430 Length = 1137 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RMGAANNIY 9 RMGAA+NIY Sbjct: 938 RMGAADNIY 946>NP_001271427 Length = 573 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NNI Sbjct: 342 MGAMNNI 348>NP_689559 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NNI Sbjct: 342 MGAMNNI 348>NP_001271428 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NNI Sbjct: 205 MGAMNNI 211>NP_114401 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AANNIY 9 AANN+Y Sbjct: 526 AANNVY 531>XP_006721509 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NNI Sbjct: 309 MGAMNNI 315>XP_006721508 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NNI Sbjct: 342 MGAMNNI 348>XP_006721507 Length = 569 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NNI Sbjct: 342 MGAMNNI 348>NP_065962 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 LGAVNRIY 72>XP_005250744 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 LGAVNRIY 72>XP_005250743 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 LGAVNRIY 72>XP_006716234 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 LGAVNRIY 72>XP_006712302 Length = 782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RMGAANNIY 9 R+G+ NIY Sbjct: 458 RVGSLRNIY 466>XP_006712301 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RMGAANNIY 9 R+G+ NIY Sbjct: 424 RVGSLRNIY 432>XP_006712300 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RMGAANNIY 9 R+G+ NIY Sbjct: 424 RVGSLRNIY 432>XP_006712299 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RMGAANNIY 9 R+G+ NIY Sbjct: 509 RVGSLRNIY 517>XP_006712298 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RMGAANNIY 9 R+G+ NIY Sbjct: 558 RVGSLRNIY 566>XP_006712297 Length = 886 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RMGAANNIY 9 R+G+ NIY Sbjct: 562 RVGSLRNIY 570>NP_001099013 Length = 492 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 LGAVNRIY 72>NP_055853 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MGAANNIY 9 +GAA+N++ Sbjct: 76 LGAASNVF 83>NP_001004725 Length = 309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 MGAANNI 8 MGA NN+ Sbjct: 1 MGAKNNV 7>NP_861440 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 LGAVNRIY 72>NP_116107 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MGAANNIY 9 +GAA N++ Sbjct: 126 LGAATNVF 133>NP_001230199 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GAA N Y Sbjct: 70 LGAAQNYY 77>NP_055176 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GAA N Y Sbjct: 70 LGAAQNYY 77>NP_001076441 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RMGAANNIY 9 R+G NN Y Sbjct: 31 RVGLGNNSY 39>NP_001230200 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GAA N Y Sbjct: 70 LGAAQNYY 77>NP_115618 Length = 1896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 65 VGAVNRIY 72>XP_006719164 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RMGAANNIY 9 R+G NN Y Sbjct: 31 RVGLGNNSY 39>XP_005253463 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RMGAANNIY 9 R+G NN Y Sbjct: 31 RVGLGNNSY 39>XP_006713726 Length = 1910 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 MGAANNIY 9 +GA N IY Sbjct: 83 VGAVNRIY 90>XP_005264089 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MGAANNIY 9 +GAA N++ Sbjct: 65 LGAATNVF 72>NP_067015 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 GAANNIY 9 GAA+N Y Sbjct: 159 GAASNFY 165Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.132 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,540 Number of extensions: 522 Number of successful extensions: 33 Number of sequences better than 10000.0: 33 Number of HSP's gapped: 33 Number of HSP's successfully gapped: 33 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |