Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_839943 16 5631 NP_003354 16 7355 NP_060052 16 7355 NP_955475 16 7355 XP_005245372 16 7355 NP_000262 15 9605 NP_001268669 15 9605 NP_001702 15 9605 NP_001165882 15 9605 NP_573403 15 9605 NP_001165883 15 9605 NP_001244897 15 9605 NP_079411 15 9605 NP_001268668 15 9605 NP_620409 15 9605 NP_060217 15 9605 NP_877496 15 9605 NP_065741 15 9605 XP_005260559 15 9605 XP_005260558 15 9605 XP_006723918 15 9605 XP_005260557 15 9605 XP_005260556 15 9605 XP_005260555 15 9605 XP_005260554 15 9605 XP_006723917 15 9605 XP_005260553 15 9605 XP_006722614 15 9605 XP_005258412 15 9605 XP_005258411 15 9605 XP_005258409 15 9605 XP_005258408 15 9605 XP_006722613 15 9605 XP_005258407 15 9605 XP_005258406 15 9605 XP_005258405 15 9605 XP_005258404 15 9605 XP_005258403 15 9605 XP_006722542 15 9605 XP_005258336 15 9605 XP_005258335 15 9605 XP_005258334 15 9605 XP_006710999 15 9605 XP_006710998 15 9605>NP_839943 Length = 1631 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLYAVSLVN 9 R+ AVSL+N Sbjct: 524 RVLAVSLIN 532>NP_003354 Length = 963 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLYAVSLVN 9 RL+ SLVN Sbjct: 705 RLFTFSLVN 713>NP_060052 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YAVSLVN 9 YAV LVN Sbjct: 274 YAVELVN 280>NP_955475 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLYAVSLVN 9 RL+ SLVN Sbjct: 658 RLFTFSLVN 666>XP_005245372 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 YAVSLVN 9 YAV LVN Sbjct: 274 YAVELVN 280>NP_000262 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 L AVSLVN Sbjct: 1149 LNAVSLVN 1156>NP_001268669 Length = 1622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>NP_001702 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 LYA+ LVN Sbjct: 116 LYALVLVN 123>NP_001165882 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YAVSLV+ Sbjct: 220 YAVSLVD 226>NP_573403 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 234 YAIALIN 240>NP_001165883 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YAVSLV+ Sbjct: 222 YAVSLVD 228>NP_001244897 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 LY+VSL N Sbjct: 16 LYSVSLQN 23>NP_079411 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>NP_001268668 Length = 1422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>NP_620409 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YAVSLV+ Sbjct: 222 YAVSLVD 228>NP_060217 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YAVSLVN 9 YAV L+N Sbjct: 1754 YAVQLIN 1760>NP_877496 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 234 YAIALIN 240>NP_065741 Length = 2617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YAVSLVN 9 YAV L+N Sbjct: 1754 YAVQLIN 1760>XP_005260559 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 51 YAIALIN 57>XP_005260558 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 51 YAIALIN 57>XP_006723918 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 146 YAIALIN 152>XP_005260557 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 146 YAIALIN 152>XP_005260556 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 146 YAIALIN 152>XP_005260555 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 146 YAIALIN 152>XP_005260554 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 146 YAIALIN 152>XP_006723917 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 234 YAIALIN 240>XP_005260553 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YA++L+N Sbjct: 234 YAIALIN 240>XP_006722614 Length = 1589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258412 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258411 Length = 1409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258409 Length = 1430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258408 Length = 1447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_006722613 Length = 1523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258407 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258406 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258405 Length = 1597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258404 Length = 1605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_005258403 Length = 1614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LYAVSLVN 9 +YA++LVN Sbjct: 263 VYAMTLVN 270>XP_006722542 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 L AVSLVN Sbjct: 1166 LNAVSLVN 1173>XP_005258336 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 L AVSLVN Sbjct: 1149 LNAVSLVN 1156>XP_005258335 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 L AVSLVN Sbjct: 1166 LNAVSLVN 1173>XP_005258334 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LYAVSLVN 9 L AVSLVN Sbjct: 1166 LNAVSLVN 1173>XP_006710999 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YAVSLV+ Sbjct: 161 YAVSLVD 167>XP_006710998 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 YAVSLVN 9 YAVSLV+ Sbjct: 222 YAVSLVD 228Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.138 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,932 Number of extensions: 584 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |