Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 869 NP_671714 19 869 XP_006715890 19 869 XP_005250160 19 869 XP_005250159 19 869 NP_001164120 17 3301 NP_112483 17 3301 NP_001096078 17 3301 XP_005262363 17 3301 XP_005262362 17 3301 XP_005262361 17 3301 XP_005262360 17 3301 XP_005262358 17 3301 XP_006715077 17 3301 XP_005247178 17 3301 NP_005624 16 5631 NP_001093156 16 5631 NP_071336 16 5631 NP_620714 16 5631 NP_008870 16 5631 XP_005268078 16 5631 XP_006718519 16 5631 XP_006718517 16 5631 XP_006718516 16 5631 XP_006718515 16 5631 XP_006718514 16 5631 XP_005273885 16 5631 XP_005273884 16 5631 XP_005273883 16 5631 XP_005273882 16 5631 XP_005273881 16 5631 XP_005264572 16 5631 NP_062550 16 7355 NP_001008212 16 7355 NP_068815 16 7355 NP_001008214 16 7355 NP_001008213 16 7355 NP_002433 16 7355 NP_116575 16 7355 NP_001263397 16 7355 NP_001469 16 7355 NP_001263398 16 7355 XP_006719467 16 7355 XP_006719466 16 7355 XP_006719394 16 7355 XP_005268830 16 7355 XP_005252395 16 7355 NP_078966 15 9605 NP_055558 15 9605 NP_001094060 15 9605 NP_001164121 15 9605 NP_002354 15 9605 NP_803134 15 9605 NP_998821 15 9605 NP_796379 15 9605 XP_005248098 15 9605 XP_006713998 15 9605 XP_006713997 15 9605>NP_005742 Length = 3907 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R TTYRSRS Sbjct: 3827 RHTTYRSRS 3835>NP_671714 Length = 3899 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R TTYRSRS Sbjct: 3819 RHTTYRSRS 3827>XP_006715890 Length = 3860 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R TTYRSRS Sbjct: 3780 RHTTYRSRS 3788>XP_005250160 Length = 3939 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R TTYRSRS Sbjct: 3859 RHTTYRSRS 3867>XP_005250159 Length = 3952 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R TTYRSRS Sbjct: 3872 RHTTYRSRS 3880>NP_001164120 Length = 717 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>NP_112483 Length = 734 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>NP_001096078 Length = 2263 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTTYRSR 8 LTTYRS+ Sbjct: 2035 LTTYRSK 2041>XP_005262363 Length = 489 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>XP_005262362 Length = 490 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>XP_005262361 Length = 536 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>XP_005262360 Length = 557 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>XP_005262358 Length = 733 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLTTYRSRS 9 R+T +RSRS Sbjct: 72 RITVWRSRS 80>XP_006715077 Length = 140 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLTTYRSRS 9 R T YRSRS Sbjct: 71 RKTLYRSRS 79>XP_005247178 Length = 2263 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LTTYRSR 8 LTTYRS+ Sbjct: 2035 LTTYRSK 2041>NP_005624 Length = 1333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 628 LTTYRS 633>NP_001093156 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RLTTYRSR 8 R+TT+R+R Sbjct: 98 RITTWRNR 105>NP_071336 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RLTTYRSR 8 R+TT+R+R Sbjct: 98 RITTWRNR 105>NP_620714 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>NP_008870 Length = 1332 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 626 LTTYRS 631>XP_005268078 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 566 LTTYRS 571>XP_006718519 Length = 517 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_006718517 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_006718516 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_006718515 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_006718514 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_005273885 Length = 591 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_005273884 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_005273883 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_005273882 Length = 679 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_005273881 Length = 751 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 26 LTTYRS 31>XP_005264572 Length = 1318 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 LTTYRS Sbjct: 628 LTTYRS 633>NP_062550 Length = 393 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTTYRSRS 9 L +YRSRS Sbjct: 330 LESYRSRS 337>NP_001008212 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTTYRSRS 9 L+ YRSRS Sbjct: 211 LSKYRSRS 218>NP_068815 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTTYRSRS 9 L+ YRSRS Sbjct: 211 LSKYRSRS 218>NP_001008214 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTTYRSRS 9 L+ YRSRS Sbjct: 211 LSKYRSRS 218>NP_001008213 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTTYRSRS 9 L+ YRSRS Sbjct: 211 LSKYRSRS 218>NP_002433 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTYRSRS 9 TTY SRS Sbjct: 225 TTYASRS 231>NP_116575 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLTTYRSR 8 R T+YRSR Sbjct: 127 RNTSYRSR 134>NP_001263397 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLTTYRSRS 9 +L TY SRS Sbjct: 166 QLVTYSSRS 174>NP_001469 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLTTYRSRS 9 +L TY SRS Sbjct: 221 QLVTYSSRS 229>NP_001263398 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLTTYRSRS 9 +L TY SRS Sbjct: 221 QLVTYSSRS 229>XP_006719467 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTYRSRS 9 TTY SRS Sbjct: 87 TTYASRS 93>XP_006719466 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTYRSRS 9 TTY SRS Sbjct: 225 TTYASRS 231>XP_006719394 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLTTYRSRS 9 +L TY SRS Sbjct: 221 QLVTYSSRS 229>XP_005268830 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLTTYRSRS 9 +L TY SRS Sbjct: 221 QLVTYSSRS 229>XP_005252395 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LTTYRSRS 9 L+ YRSRS Sbjct: 154 LSKYRSRS 161>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTTYR 6 RLTTY+ Sbjct: 5697 RLTTYK 5702Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RLTTYR 6 RLTTY+ Sbjct: 7753 RLTTYK 7758>NP_055558 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TTYRSR 8 TTYR+R Sbjct: 422 TTYRNR 427>NP_001094060 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TTYRSR 8 TTYR+R Sbjct: 422 TTYRNR 427>NP_001164121 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLTTYRSR 8 R+T +RSR Sbjct: 72 RITVWRSR 79>NP_002354 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTYRSRS 9 TT+R+RS Sbjct: 330 TTFRARS 336>NP_803134 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTYRSRS 9 TT+R+RS Sbjct: 330 TTFRARS 336>NP_998821 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 LTTYRS 7 +TTYRS Sbjct: 393 ITTYRS 398>NP_796379 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTYRSRS 9 TT+R+RS Sbjct: 330 TTFRARS 336>XP_005248098 Length = 1310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TTYRSR 8 TTYR+R Sbjct: 313 TTYRNR 318>XP_006713998 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TTYRSR 8 TTYR+R Sbjct: 422 TTYRNR 427>XP_006713997 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 TTYRSR 8 TTYR+R Sbjct: 422 TTYRNR 427Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.122 0.321 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 461,083 Number of extensions: 462 Number of successful extensions: 59 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |