Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 19 665 NP_001138390 19 665 NP_001138386 19 665 NP_001138387 19 665 NP_000132 19 665 NP_075259 19 665 NP_001138388 19 665 NP_001138391 19 665 NP_001138385 19 665 NP_075418 19 665 XP_006717776 19 665 XP_006717775 19 665 XP_006717774 19 665 XP_006717773 19 665 XP_006717772 19 665 XP_006717771 19 665 NP_001121631 17 3301 XP_006721617 17 3301 XP_005256773 17 3301 XP_005256772 17 3301 NP_001068567 17 4312 NP_003717 17 4312 XP_006726671 17 4312 XP_005257812 17 4312 NP_071397 16 5631 NP_003039 16 5631 XP_005276458 16 5631 XP_006710877 16 5631 XP_005244829 16 5631 XP_005275762 16 5631 NP_054859 16 7355 NP_001120679 16 7355 NP_065871 16 7355 NP_056073 16 7355 XP_006726572 16 7355 XP_006726571 16 7355 XP_006726570 16 7355 XP_003960511 16 7355 XP_005260528 16 7355 XP_006717414 16 7355 XP_006717082 16 7355 XP_006717081 16 7355 XP_006714294 16 7355 XP_006712620 16 7355 XP_005246688 16 7355 XP_005246689 16 7355 XP_001718723 16 7355 XP_006710283 16 7355 XP_006710282 16 7355 NP_001007103 15 9605 NP_115814 15 9605 NP_055090 15 9605 NP_463459 15 9605 NP_001271236 15 9605 NP_001271235 15 9605 NP_001015055 15 9605 NP_071918 15 9605 XP_005254648 15 9605 XP_005267218 15 9605 XP_006715641 15 9605 XP_006715640 15 9605 XP_006715639 15 9605 XP_005264536 15 9605 XP_005264535 15 9605>NP_001138389 Length = 705 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 334 RLSSTADTP 342>NP_001138390 Length = 704 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 333 RLSSTADTP 341>NP_001138386 Length = 709 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 338 RLSSTADTP 346>NP_001138387 Length = 707 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 361 RLSSTADTP 369>NP_000132 Length = 821 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 450 RLSSTADTP 458>NP_075259 Length = 822 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 451 RLSSTADTP 459>NP_001138388 Length = 706 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 335 RLSSTADTP 343>NP_001138391 Length = 680 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 362 RLSSTADTP 370>NP_001138385 Length = 769 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 451 RLSSTADTP 459>NP_075418 Length = 732 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 361 RLSSTADTP 369>XP_006717776 Length = 806 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 469 RLSSTADTP 477>XP_006717775 Length = 726 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 355 RLSSTADTP 363>XP_006717774 Length = 752 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 381 RLSSTADTP 389>XP_006717773 Length = 807 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 470 RLSSTADTP 478>XP_006717772 Length = 838 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 467 RLSSTADTP 475>XP_006717771 Length = 839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLSLTADTP 9 RLS TADTP Sbjct: 468 RLSSTADTP 476>NP_001121631 Length = 832 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLTA TP Sbjct: 807 LSLTAPTP 814>XP_006721617 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLTA TP Sbjct: 616 LSLTAPTP 623>XP_005256773 Length = 641 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLTA TP Sbjct: 616 LSLTAPTP 623>XP_005256772 Length = 803 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLTA TP Sbjct: 778 LSLTAPTP 785>NP_001068567 Length = 358 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLT+D P Sbjct: 78 LSLTSDAP 85>NP_003717 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLT+D P Sbjct: 78 LSLTSDAP 85>XP_006726671 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLSLTA P Sbjct: 249 RLSLTAPLP 257>XP_005257812 Length = 341 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSLT+D P Sbjct: 78 LSLTSDAP 85>NP_071397 Length = 1276 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSL+ DTP Sbjct: 1238 LSLSEDTP 1245>NP_003039 Length = 812 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 R SLTADT Sbjct: 621 RHSLTADT 628>XP_005276458 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L LTAD+P Sbjct: 166 LCLTADSP 173>XP_006710877 Length = 1276 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSL+ DTP Sbjct: 1238 LSLSEDTP 1245>XP_005244829 Length = 1277 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 LSL+ DTP Sbjct: 1239 LSLSEDTP 1246>XP_005275762 Length = 263 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L LTAD+P Sbjct: 166 LCLTADSP 173>NP_054859 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSLTADTP 9 LSLT D P Sbjct: 414 LSLTPDVP 421>NP_001120679 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSLTADTP 9 LSLT D P Sbjct: 414 LSLTPDVP 421>NP_065871 Length = 1659 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLSL D+P Sbjct: 832 RLSLCEDSP 840>NP_056073 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSLTAD 7 RLSLT+D Sbjct: 1095 RLSLTSD 1101>XP_006726572 Length = 2066 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 774 LTLTAHTP 781>XP_006726571 Length = 3681 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 2430 LTLTAHTP 2437>XP_006726570 Length = 3722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 2430 LTLTAHTP 2437>XP_003960511 Length = 3722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 2430 LTLTAHTP 2437>XP_005260528 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLSL D+P Sbjct: 129 RLSLCEDSP 137>XP_006717414 Length = 5100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 3808 LTLTAHTP 3815>XP_006717082 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSLTAD 7 RLSLT+D Sbjct: 1027 RLSLTSD 1033>XP_006717081 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLSLTAD 7 RLSLT+D Sbjct: 1085 RLSLTSD 1091>XP_006714294 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 R+SLT D P Sbjct: 17 RVSLTKDGP 25>XP_006712620 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSLTADTP 9 LSLT D P Sbjct: 414 LSLTPDVP 421>XP_005246688 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSLTADTP 9 LSLT D P Sbjct: 414 LSLTPDVP 421>XP_005246689 Length = 954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LSLTADTP 9 LSLT D P Sbjct: 414 LSLTPDVP 421>XP_001718723 Length = 1091 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SLTADTP 9 SLTAD P Sbjct: 1078 SLTADIP 1084>XP_006710283 Length = 2066 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 774 LTLTAHTP 781>XP_006710282 Length = 2621 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LSLTADTP 9 L+LTA TP Sbjct: 1329 LTLTAHTP 1336>NP_001007103 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 +LSL ADT Sbjct: 151 KLSLKADT 158>NP_115814 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 +LSL ADT Sbjct: 176 KLSLKADT 183>NP_055090 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLS+ D+P Sbjct: 526 RLSIQTDSP 534>NP_463459 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLS+ D+P Sbjct: 541 RLSIQTDSP 549>NP_001271236 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLS ++TP Sbjct: 541 RLSFASETP 549>NP_001271235 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLS ++TP Sbjct: 498 RLSFASETP 506>NP_001015055 Length = 563 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLSL +D P Sbjct: 28 RLSLFSDLP 36>NP_071918 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLS ++TP Sbjct: 1313 RLSFASETP 1321>XP_005254648 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLS ++TP Sbjct: 1336 RLSFASETP 1344>XP_005267218 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 +LSL ADT Sbjct: 176 KLSLKADT 183>XP_006715641 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 +LSL ADT Sbjct: 176 KLSLKADT 183>XP_006715640 Length = 780 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 +LSL ADT Sbjct: 176 KLSLKADT 183>XP_006715639 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLSLTADT 8 +LSL ADT Sbjct: 211 KLSLKADT 218>XP_005264536 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLSL +D P Sbjct: 28 RLSLFSDLP 36>XP_005264535 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLSLTADTP 9 RLSL +D P Sbjct: 28 RLSLFSDLP 36Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.125 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 473,048 Number of extensions: 887 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |