Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1482 XP_005248577 18 1482 XP_005248576 18 1482 NP_570629 17 3301 NP_001034439 17 3301 NP_001927 17 3301 NP_001277181 17 3301 XP_006715935 17 3301 XP_006715934 17 3301 XP_005263378 17 3301 NP_003719 17 3301 NP_060064 17 3301 NP_055747 16 5631 XP_006716351 16 5631 XP_005247294 16 5631 XP_005247293 16 5631 XP_005247292 16 5631 XP_005247291 16 5631 XP_005247290 16 5631 XP_006713603 16 5631 XP_005247289 16 5631 NP_543148 16 5631 NP_001136105 16 7355 NP_000704 16 7355 NP_055123 16 7355 NP_001077059 16 7355 NP_003326 16 7355 NP_001238784 16 7355 NP_001238780 16 7355 NP_001238781 16 7355 NP_001238782 16 7355 XP_005256637 16 7355 XP_005256636 16 7355 XP_005265487 16 7355 XP_006713384 16 7355 XP_006712099 16 7355 XP_005264439 16 7355 XP_005264438 16 7355 NP_060197 16 7355 NP_001258825 15 9605 NP_001258824 15 9605 NP_079426 15 9605 NP_056355 15 9605 NP_703143 15 9605 NP_057340 15 9605 XP_006720533 15 9605 XP_006720532 15 9605 XP_005254354 15 9605 XP_006711619 15 9605 XP_006711618 15 9605 NP_005584 15 9605>NP_005912 Length = 1512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLRIAVFGA 9 RLRIA FGA Sbjct: 1383 RLRIADFGA 1391>XP_005248577 Length = 1349 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLRIAVFGA 9 RLRIA FGA Sbjct: 1220 RLRIADFGA 1228>XP_005248576 Length = 1375 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RLRIAVFGA 9 RLRIA FGA Sbjct: 1246 RLRIADFGA 1254>NP_570629 Length = 865 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRIAVFG 8 R R+AVFG Sbjct: 703 RTRVAVFG 710>NP_001034439 Length = 801 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRIAVFG 8 R R+AVFG Sbjct: 639 RTRVAVFG 646>NP_001927 Length = 803 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRIAVFG 8 R R+AVFG Sbjct: 641 RTRVAVFG 648>NP_001277181 Length = 758 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRIAVFG 8 R R+AVFG Sbjct: 596 RTRVAVFG 603>XP_006715935 Length = 804 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRIAVFG 8 R R+AVFG Sbjct: 642 RTRVAVFG 649>XP_006715934 Length = 804 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRIAVFG 8 R R+AVFG Sbjct: 642 RTRVAVFG 649>XP_005263378 Length = 950 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RLRIAVFG 8 RL++A+FG Sbjct: 700 RLKLAIFG 707>NP_003719 Length = 931 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RLRIAVFG 8 RL++A+FG Sbjct: 681 RLKLAIFG 688>NP_060064 Length = 199 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RIAVFGA 9 R+AVFGA Sbjct: 9 RVAVFGA 15>NP_055747 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_006716351 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RLRIAVFG 8 +L++AVFG Sbjct: 602 QLKVAVFG 609>XP_005247294 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 101 LRITVFGS 108>XP_005247293 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247292 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247291 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 253 LRITVFGS 260>XP_005247290 Length = 834 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 273 LRITVFGS 280>XP_006713603 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 273 LRITVFGS 280>XP_005247289 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LRI VFG+ Sbjct: 273 LRITVFGS 280>NP_543148 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RLRIAVFG 8 +L++AVFG Sbjct: 690 QLKVAVFG 697>NP_001136105 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>NP_000704 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RIAVFGA 9 +IA+FGA Sbjct: 5 KIAIFGA 11>NP_055123 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>NP_001077059 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLRIAVFGA 9 RL++ FGA Sbjct: 303 RLKVLAFGA 311>NP_003326 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RIAVFGA 9 +IAVFGA Sbjct: 418 QIAVFGA 424>NP_001238784 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>NP_001238780 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>NP_001238781 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>NP_001238782 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 131 LRVVVFGS 138>XP_005256637 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>XP_005256636 Length = 880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+ VFG+ Sbjct: 517 LRVVVFGS 524>XP_005265487 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RIAVFGA 9 +IAVFGA Sbjct: 418 QIAVFGA 424>XP_006713384 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RIAVFGA 9 +IAVFGA Sbjct: 418 QIAVFGA 424>XP_006712099 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLRIAVFGA 9 RL++ FGA Sbjct: 303 RLKVLAFGA 311>XP_005264439 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLRIAVFGA 9 RL++ FGA Sbjct: 348 RLKVLAFGA 356>XP_005264438 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLRIAVFGA 9 RL++ FGA Sbjct: 348 RLKVLAFGA 356>NP_060197 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLRIAVFGA 9 RL++ FGA Sbjct: 348 RLKVLAFGA 356>NP_001258825 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+A FGA Sbjct: 298 LRLADFGA 305>NP_001258824 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+A FGA Sbjct: 346 LRLADFGA 353>NP_079426 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+A FGA Sbjct: 428 LRLADFGA 435>NP_056355 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRIAVFG 8 LR+A+FG Sbjct: 1244 LRLALFG 1250>NP_703143 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RLRIAVF 7 RLR AVF Sbjct: 166 RLRFAVF 172>NP_057340 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRIAVFG 8 LR+A+FG Sbjct: 11 LRLALFG 17>XP_006720533 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRIAVFG 8 LR+A+FG Sbjct: 949 LRLALFG 955>XP_006720532 Length = 1333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRIAVFG 8 LR+A+FG Sbjct: 1184 LRLALFG 1190>XP_005254354 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LRIAVFG 8 LR+A+FG Sbjct: 1244 LRLALFG 1250>XP_006711619 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+A FGA Sbjct: 379 LRLADFGA 386>XP_006711618 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LRIAVFGA 9 LR+A FGA Sbjct: 428 LRLADFGA 435>NP_005584 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RIAVFGA 9 R+A FGA Sbjct: 35 RVAAFGA 41Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.349 0.157 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 350,482 Number of extensions: 504 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |