Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 390 NP_001185763 20 390 NP_055459 20 390 NP_001002811 20 390 NP_001002812 20 390 XP_006726410 20 390 XP_006711719 20 390 XP_006711717 20 390 XP_006711716 20 390 XP_006711715 20 390 XP_006711714 20 390 XP_006711713 20 390 XP_006711712 20 390 XP_006711711 20 390 XP_006711710 20 390 XP_006711709 20 390 XP_005277503 20 390 XP_005273038 20 390 XP_006711708 20 390 XP_005277500 20 390 XP_006711707 20 390 XP_005277499 20 390 XP_006711706 20 390 XP_006711705 20 390 XP_006711164 20 390 XP_003846806 20 390 NP_001231118 17 2528 NP_055564 17 2528 NP_001231119 17 2528 XP_006720406 17 2528 XP_006720405 17 2528 XP_006720404 17 2528 XP_006720403 17 2528 XP_006720402 17 2528 XP_006720401 17 2528 XP_006720400 17 2528 XP_006720399 17 2528 NP_940953 17 4312 NP_689876 17 4312 NP_001273176 17 4312 XP_006711473 17 4312 XP_006711472 17 4312 XP_005273179 17 4312 XP_005273178 17 4312 NP_542381 16 5631 NP_683695 16 5631 XP_005254808 16 5631 NP_001011552 16 7355 XP_005263997 16 7355 NP_899236 15 9605 NP_056363 15 9605 NP_001138241 15 9605 NP_001138242 15 9605 NP_055668 15 9605 NP_036415 15 9605 XP_006721677 15 9605 XP_006721676 15 9605 XP_006715232 15 9605 XP_005249382 15 9605 XP_005249381 15 9605 XP_005249380 15 9605 XP_005249379 15 9605 XP_005249377 15 9605 XP_005249376 15 9605 XP_005249375 15 9605 XP_005249374 15 9605 XP_005249373 15 9605 XP_005249372 15 9605 XP_005249371 15 9605 XP_005249370 15 9605 XP_005249369 15 9605 XP_005249368 15 9605 XP_005249367 15 9605 XP_006711326 15 9605 XP_005273145 15 9605 XP_006711325 15 9605 NP_001091979 15 9605 NP_982276 15 9605>NP_001185761 Length = 2240 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 588 RLRDVLSSN 596>NP_001185763 Length = 2362 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 522 RLRDVLSSN 530>NP_055459 Length = 2346 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 522 RLRDVLSSN 530>NP_001002811 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>NP_001002812 Length = 969 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 522 RLRDVLSSN 530>XP_006726410 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 597 RLRDVLSSN 605>XP_006711719 Length = 2302 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 588 RLRDVLSSN 596>XP_006711717 Length = 2385 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 588 RLRDVLSSN 596>XP_006711716 Length = 2411 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 588 RLRDVLSSN 596>XP_006711715 Length = 2428 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 522 RLRDVLSSN 530>XP_006711714 Length = 2429 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 522 RLRDVLSSN 530>XP_006711713 Length = 2432 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 525 RLRDVLSSN 533>XP_006711712 Length = 2473 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711711 Length = 2482 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711710 Length = 2494 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 588 RLRDVLSSN 596>XP_006711709 Length = 2495 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 588 RLRDVLSSN 596>XP_005277503 Length = 2498 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_005273038 Length = 2509 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711708 Length = 2512 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_005277500 Length = 2525 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711707 Length = 2553 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_005277499 Length = 2561 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711706 Length = 2591 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711705 Length = 2592 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 685 RLRDVLSSN 693>XP_006711164 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 597 RLRDVLSSN 605>XP_003846806 Length = 136 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RLRDV+SSN Sbjct: 51 RLRDVLSSN 59>NP_001231118 Length = 1644 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 32 RLREVVSQN 40>NP_055564 Length = 1472 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>NP_001231119 Length = 1533 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 5 RLREVVSQN 13>XP_006720406 Length = 1591 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720405 Length = 1347 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720404 Length = 1477 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720403 Length = 1486 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720402 Length = 1487 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720401 Length = 1504 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720400 Length = 1526 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>XP_006720399 Length = 1548 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 RLR+V+S N Sbjct: 20 RLREVVSQN 28>NP_940953 Length = 1907 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 +L+DVIS N Sbjct: 1313 KLKDVISMN 1321>NP_689876 Length = 583 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRD ISS Sbjct: 185 RLRDYISS 192>NP_001273176 Length = 557 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRD ISS Sbjct: 185 RLRDYISS 192>XP_006711473 Length = 583 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRD ISS Sbjct: 185 RLRDYISS 192>XP_006711472 Length = 583 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRD ISS Sbjct: 185 RLRDYISS 192>XP_005273179 Length = 785 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 +L+DVIS N Sbjct: 191 KLKDVISMN 199>XP_005273178 Length = 1931 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLRDVISSN 9 +L+DVIS N Sbjct: 1313 KLKDVISMN 1321>NP_542381 Length = 267 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 LR++ISSN Sbjct: 150 LREMISSN 157>NP_683695 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RLRDVISS 8 R+RDVI+S Sbjct: 256 RVRDVINS 263>XP_005254808 Length = 365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 LR++ISSN Sbjct: 219 LREMISSN 226>NP_001011552 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 +RD+++SN Sbjct: 592 IRDILTSN 599>XP_005263997 Length = 798 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 +RD+++SN Sbjct: 592 IRDILTSN 599>NP_899236 Length = 5497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 2107 LQDIISKN 2114>NP_056363 Length = 5171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 1781 LQDIISKN 1788>NP_001138241 Length = 5675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 2285 LQDIISKN 2292>NP_001138242 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 2147 LQDIISKN 2154>NP_055668 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRDV+ S Sbjct: 863 RLRDVMCS 870>NP_036415 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRDV+ + Sbjct: 162 RLRDVVDN 169>XP_006721677 Length = 1028 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRDV+ S Sbjct: 840 RLRDVMCS 847>XP_006721676 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRDV+ S Sbjct: 885 RLRDVMCS 892>XP_006715232 Length = 7498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4193 LQDIISKN 4200>XP_005249382 Length = 5732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 2318 LQDIISKN 2325>XP_005249381 Length = 7281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 3867 LQDIISKN 3874>XP_005249380 Length = 7607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4193 LQDIISKN 4200>XP_005249379 Length = 7633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4219 LQDIISKN 4226>XP_005249377 Length = 7640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4226 LQDIISKN 4233>XP_005249376 Length = 7647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4233 LQDIISKN 4240>XP_005249375 Length = 7680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4266 LQDIISKN 4273>XP_005249374 Length = 7709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4404 LQDIISKN 4411>XP_005249373 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4309 LQDIISKN 4316>XP_005249372 Length = 7785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4371 LQDIISKN 4378>XP_005249371 Length = 7788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4404 LQDIISKN 4411>XP_005249370 Length = 7794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4404 LQDIISKN 4411>XP_005249369 Length = 7797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4383 LQDIISKN 4390>XP_005249368 Length = 7812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4404 LQDIISKN 4411>XP_005249367 Length = 7818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LRDVISSN 9 L+D+IS N Sbjct: 4404 LQDIISKN 4411>XP_006711326 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 L+D+++SN Sbjct: 284 LKDILTSN 291>XP_005273145 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 L+D+++SN Sbjct: 284 LKDILTSN 291>XP_006711325 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LRDVISSN 9 L+D+++SN Sbjct: 284 LKDILTSN 291>NP_001091979 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RLRDVISS 8 RLRDV+ S Sbjct: 818 RLRDVMCS 825>NP_982276 Length = 107 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RLRDVISSN 9 RL+++ISS+ Sbjct: 65 RLKNIISSS 73Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.133 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,815 Number of extensions: 790 Number of successful extensions: 78 Number of sequences better than 10000.0: 78 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |