Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005912                                                              20     390
XP_005248577                                                           20     390
XP_005248576                                                           20     390
NP_015628                                                              17    3301
NP_054742                                                              17    4312
NP_653316                                                              17    4312
NP_065135                                                              17    4312
XP_005264948                                                           17    4312
XP_005264946                                                           17    4312
NP_612435                                                              16    5631
NP_001273187                                                           16    5631
NP_004562                                                              16    5631
XP_005249665                                                           16    5631
XP_005249664                                                           16    5631
XP_005249663                                                           16    5631
NP_001180210                                                           16    7355
NP_001092094                                                           16    7355
NP_000372                                                              16    7355
NP_150632                                                              16    7355
NP_001180206                                                           16    7355
NP_001180209                                                           16    7355
NP_001180207                                                           16    7355
NP_150631                                                              16    7355
NP_001180208                                                           16    7355
NP_001077430                                                           16    7355
NP_775907                                                              16    7355
NP_640337                                                              16    7355
NP_001121187                                                           16    7355
NP_071345                                                              16    7355
XP_005274595                                                           16    7355
XP_006724556                                                           16    7355
XP_005274594                                                           16    7355
XP_005274593                                                           16    7355
XP_006724555                                                           16    7355
XP_005258866                                                           16    7355
XP_006718957                                                           16    7355
XP_005271700                                                           16    7355
XP_005271699                                                           16    7355
XP_006715402                                                           16    7355
NP_620133                                                              15    9605
NP_006729                                                              15    9605
NP_001275929                                                           15    9605
NP_009131                                                              15    9605
NP_001275930                                                           15    9605
NP_001004318                                                           15    9605
NP_705837                                                              15    9605
NP_001269257                                                           15    9605
NP_795352                                                              15    9605
NP_001120914                                                           15    9605
NP_055118                                                              15    9605
NP_525124                                                              15    9605
NP_001036249                                                           15    9605
NP_954974                                                              15    9605
NP_001230154                                                           15    9605
NP_085059                                                              15    9605
NP_071908                                                              15    9605
NP_001269256                                                           15    9605
NP_001192248                                                           15    9605
XP_006724236                                                           15    9605
XP_006724226                                                           15    9605
XP_006724225                                                           15    9605
XP_005256815                                                           15    9605
XP_005256814                                                           15    9605
XP_005256813                                                           15    9605
XP_005254907                                                           15    9605
XP_005254906                                                           15    9605
XP_005254905                                                           15    9605
XP_005254904                                                           15    9605
XP_005254903                                                           15    9605
XP_005254902                                                           15    9605
XP_005254901                                                           15    9605
XP_005254900                                                           15    9605
XP_005254899                                                           15    9605
XP_005254898                                                           15    9605
XP_005254897                                                           15    9605
XP_006720441                                                           15    9605
XP_006720440                                                           15    9605
XP_006720439                                                           15    9605
XP_005254896                                                           15    9605
XP_005266187                                                           15    9605
XP_005266186                                                           15    9605
XP_005266185                                                           15    9605
XP_005266183                                                           15    9605
XP_005266182                                                           15    9605
XP_005266181                                                           15    9605
XP_005266180                                                           15    9605
XP_006716241                                                           15    9605
XP_005250769                                                           15    9605
XP_005250768                                                           15    9605
XP_005250767                                                           15    9605
XP_006714268                                                           15    9605
XP_005263031                                                           15    9605
XP_006714267                                                           15    9605
XP_006714266                                                           15    9605
XP_006714265                                                           15    9605
XP_006714264                                                           15    9605
XP_006714263                                                           15    9605
XP_006714262                                                           15    9605
XP_006712017                                                           15    9605
XP_006710340                                                           15    9605
XP_005270398                                                           15    9605
XP_006710339                                                           15    9605
XP_006710338                                                           15    9605
NP_001120913                                                           15    9605
NP_149117                                                              15    9605
>NP_005912
          Length = 1512

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RLLQPV DT
Sbjct: 678 RLLQPVVDT 686
>XP_005248577
          Length = 1349

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RLLQPV DT
Sbjct: 515 RLLQPVVDT 523
>XP_005248576
          Length = 1375

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RLLQPV DT
Sbjct: 541 RLLQPVVDT 549
>NP_015628
          Length = 1119

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RLLQ ++DT
Sbjct: 464 RLLQDISDT 472
>NP_054742
          Length = 494

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QPVADT
Sbjct: 236 QPVADT 241
>NP_653316
          Length = 833

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           R+L P+A+T
Sbjct: 497 RVLDPIAET 505
>NP_065135
          Length = 450

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  LQPVADT 9
          L+PVADT
Sbjct: 45 LRPVADT 51
>XP_005264948
          Length = 581

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           R+L P+A+T
Sbjct: 497 RVLDPIAET 505
>XP_005264946
          Length = 810

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           R+L P+A+T
Sbjct: 497 RVLDPIAET 505
>NP_612435
          Length = 547

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  RLLQPVADT 9
          RLLQP+  T
Sbjct: 59 RLLQPIRAT 67
>NP_001273187
          Length = 319

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           R+LQP+ D+
Sbjct: 199 RILQPMLDS 207
>NP_004562
          Length = 436

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           R+LQP+ D+
Sbjct: 316 RILQPMLDS 324
>XP_005249665
          Length = 422

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  RLLQPVADT 9
          RLLQP+  T
Sbjct: 59 RLLQPIRAT 67
>XP_005249664
          Length = 493

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  RLLQPVADT 9
          RLLQP+  T
Sbjct: 59 RLLQPIRAT 67
>XP_005249663
          Length = 546

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  RLLQPVADT 9
          RLLQP+  T
Sbjct: 59 RLLQPIRAT 67
>NP_001180210
          Length = 228

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_001092094
          Length = 667

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_000372
          Length = 667

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_150632
          Length = 667

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_001180206
          Length = 667

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_001180209
          Length = 451

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_001180207
          Length = 540

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_150631
          Length = 629

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_001180208
          Length = 489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>NP_001077430
          Length = 1523

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LLQPVADT 9
            LLQP  DT
Sbjct: 1308 LLQPPVDT 1315
>NP_775907
          Length = 1518

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LLQPVADT 9
            LLQP  DT
Sbjct: 1303 LLQPPVDT 1310
>NP_640337
          Length = 1115

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   RLLQPV 6
           RLLQPV
Sbjct: 802 RLLQPV 807
>NP_001121187
          Length = 1151

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   RLLQPV 6
           RLLQPV
Sbjct: 838 RLLQPV 843
>NP_071345
          Length = 472

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP+ D
Sbjct: 345 RILQPMLD 352
>XP_005274595
          Length = 540

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>XP_006724556
          Length = 680

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>XP_005274594
          Length = 718

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>XP_005274593
          Length = 718

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>XP_006724555
          Length = 718

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   RLLQPVADT 9
           RL++P+ D+
Sbjct: 160 RLIEPIPDS 168
>XP_005258866
          Length = 1486

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2    LLQPVADT 9
            LLQP  DT
Sbjct: 1271 LLQPPVDT 1278
>XP_006718957
          Length = 339

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP+ D
Sbjct: 212 RILQPMLD 219
>XP_005271700
          Length = 443

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP+ D
Sbjct: 316 RILQPMLD 323
>XP_005271699
          Length = 472

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP+ D
Sbjct: 345 RILQPMLD 352
>XP_006715402
          Length = 1135

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   RLLQPV 6
           RLLQPV
Sbjct: 822 RLLQPV 827
>NP_620133
          Length = 452

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 274 QPLADT 279
>NP_006729
          Length = 2817

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>NP_001275929
          Length = 824

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP A+
Sbjct: 404 RILQPYAE 411
>NP_009131
          Length = 2813

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>NP_001275930
          Length = 802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP A+
Sbjct: 404 RILQPYAE 411
>NP_001004318
          Length = 438

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RLLQPVA 7
           RL++PVA
Sbjct: 188 RLIEPVA 194
>NP_705837
          Length = 811

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP A+
Sbjct: 413 RILQPYAE 420
>NP_001269257
          Length = 449

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           RLL PVA+
Sbjct: 266 RLLLPVAE 273
>NP_795352
          Length = 1801

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LLQPVADT 9
            +LQ VADT
Sbjct: 1755 ILQVVADT 1762
>NP_001120914
          Length = 403

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>NP_055118
          Length = 588

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           RLL PVA+
Sbjct: 405 RLLLPVAE 412
>NP_525124
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>NP_001036249
          Length = 1113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>NP_954974
          Length = 1019

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   LLQPVADT 9
           LLQ +ADT
Sbjct: 577 LLQKMADT 584
>NP_001230154
          Length = 583

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           RLL PVA+
Sbjct: 400 RLLLPVAE 407
>NP_085059
          Length = 1516

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  LQPVADT 9
          +QP ADT
Sbjct: 54 VQPTADT 60
>NP_071908
          Length = 435

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           +L+QP+A+
Sbjct: 346 QLIQPIAE 353
>NP_001269256
          Length = 449

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           RLL PVA+
Sbjct: 266 RLLLPVAE 273
>NP_001192248
          Length = 327

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           +L+QP+A+
Sbjct: 238 QLIQPIAE 245
>XP_006724236
          Length = 587

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           RLL PVA+
Sbjct: 405 RLLLPVAE 412
>XP_006724226
          Length = 802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP A+
Sbjct: 404 RILQPYAE 411
>XP_006724225
          Length = 802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQP A+
Sbjct: 404 RILQPYAE 411
>XP_005256815
          Length = 322

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           +L+QP+A+
Sbjct: 233 QLIQPIAE 240
>XP_005256814
          Length = 327

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           +L+QP+A+
Sbjct: 238 QLIQPIAE 245
>XP_005256813
          Length = 375

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           +L+QP+A+
Sbjct: 286 QLIQPIAE 293
>XP_005254907
          Length = 2590

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   LLQPVA 7
           LLQPVA
Sbjct: 894 LLQPVA 899
>XP_005254906
          Length = 2675

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   LLQPVA 7
           LLQPVA
Sbjct: 979 LLQPVA 984
>XP_005254905
          Length = 2793

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254904
          Length = 2802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254903
          Length = 2820

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254902
          Length = 2835

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254901
          Length = 2842

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254900
          Length = 2843

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254899
          Length = 2861

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254898
          Length = 2874

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254897
          Length = 2876

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_006720441
          Length = 2881

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_006720440
          Length = 2882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_006720439
          Length = 2882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005254896
          Length = 2883

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2    LLQPVA 7
            LLQPVA
Sbjct: 1187 LLQPVA 1192
>XP_005266187
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_005266186
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_005266185
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_005266183
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_005266182
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_005266181
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_005266180
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   QPVADT 9
           QP+ADT
Sbjct: 98  QPLADT 103
>XP_006716241
          Length = 403

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>XP_005250769
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>XP_005250768
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>XP_005250767
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>XP_006714268
          Length = 1078

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 811 RLLQPASVT 819
>XP_005263031
          Length = 1113

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006714267
          Length = 1117

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006714266
          Length = 1125

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006714265
          Length = 1129

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006714264
          Length = 1129

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006714263
          Length = 1129

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006714262
          Length = 1129

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   RLLQPVADT 9
           RLLQP + T
Sbjct: 862 RLLQPASVT 870
>XP_006712017
          Length = 1028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   LLQPVADT 9
           LLQ +ADT
Sbjct: 586 LLQKMADT 593
>XP_006710340
          Length = 1815

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LLQPVADT 9
            +LQ VADT
Sbjct: 1769 ILQVVADT 1776
>XP_005270398
          Length = 1882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LLQPVADT 9
            +LQ VADT
Sbjct: 1755 ILQVVADT 1762
>XP_006710339
          Length = 1896

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LLQPVADT 9
            +LQ VADT
Sbjct: 1769 ILQVVADT 1776
>XP_006710338
          Length = 1896

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2    LLQPVADT 9
            +LQ VADT
Sbjct: 1769 ILQVVADT 1776
>NP_001120913
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   RLLQPVAD 8
           RLL+PV++
Sbjct: 335 RLLEPVSN 342
>NP_149117
          Length = 385

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RLLQPVAD 8
           R+LQ VAD
Sbjct: 162 RILQMVAD 169
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.322    0.137    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 673,503
Number of extensions: 1069
Number of successful extensions: 105
Number of sequences better than 10000.0: 105
Number of HSP's gapped: 105
Number of HSP's successfully gapped: 105
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package