Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 22 134 XP_006713721 22 134 NP_006210 21 175 NP_001242974 21 175 XP_005247589 21 175 XP_006713722 21 175 XP_005247588 21 175 XP_005247587 21 175 NP_005017 19 869 XP_006710753 19 869 XP_005263530 19 869 XP_006710752 19 869 XP_006710751 19 869 XP_006710750 19 869 XP_006710749 19 869 NP_443099 18 1935 XP_006720008 18 1935 XP_006720007 18 1935 XP_006720006 18 1935 NP_001096080 17 4312 NP_443135 17 4312 XP_006725237 17 4312 XP_005272597 17 4312 NP_004220 16 5631 XP_005272757 16 5631 XP_005272756 16 5631 NP_000290 16 7355 NP_079029 16 7355 NP_001005337 16 7355 NP_001181 16 7355 XP_006712824 16 7355 YP_003024027 16 7355 NP_001124339 15 9605 NP_000391 15 9605 NP_005067 15 9605 NP_001274182 15 9605 NP_001274181 15 9605 NP_001034869 15 9605 NP_056210 15 9605 NP_001072980 15 9605 XP_005261554 15 9605 XP_005258696 15 9605 XP_006721008 15 9605 XP_006721007 15 9605 XP_005255620 15 9605 XP_005250571 15 9605 XP_005250570 15 9605 XP_005250310 15 9605 XP_006712341 15 9605 XP_006712340 15 9605 XP_005270830 15 9605 NP_000729 15 9605 NP_065930 15 9605 NP_001035799 15 9605>NP_006209 Length = 1068 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLSVKWN Sbjct: 567 KLLLSVKWN 575>XP_006713721 Length = 1068 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLSVKWN Sbjct: 567 KLLLSVKWN 575>NP_006210 Length = 1070 Score = 21.2 bits (43), Expect = 175 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLS+KWN Sbjct: 575 KLLLSIKWN 583>NP_001242974 Length = 582 Score = 21.2 bits (43), Expect = 175 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLS+KWN Sbjct: 87 KLLLSIKWN 95>XP_005247589 Length = 1053 Score = 21.2 bits (43), Expect = 175 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLS+KWN Sbjct: 558 KLLLSIKWN 566>XP_006713722 Length = 1070 Score = 21.2 bits (43), Expect = 175 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLS+KWN Sbjct: 575 KLLLSIKWN 583>XP_005247588 Length = 1070 Score = 21.2 bits (43), Expect = 175 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLS+KWN Sbjct: 575 KLLLSIKWN 583>XP_005247587 Length = 1070 Score = 21.2 bits (43), Expect = 175 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 RLLLSVKWN 9 +LLLS+KWN Sbjct: 575 KLLLSIKWN 583>NP_005017 Length = 1044 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 548 RLLLVTKWN 556>XP_006710753 Length = 1015 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 519 RLLLVTKWN 527>XP_005263530 Length = 1043 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 547 RLLLVTKWN 555>XP_006710752 Length = 1044 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 548 RLLLVTKWN 556>XP_006710751 Length = 1044 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 548 RLLLVTKWN 556>XP_006710750 Length = 1044 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 548 RLLLVTKWN 556>XP_006710749 Length = 1044 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL KWN Sbjct: 548 RLLLVTKWN 556>NP_443099 Length = 1738 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLLSVKWN 9 +LLSVKW+ Sbjct: 1225 VLLSVKWD 1232>XP_006720008 Length = 1645 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLLSVKWN 9 +LLSVKW+ Sbjct: 1132 VLLSVKWD 1139>XP_006720007 Length = 1709 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLLSVKWN 9 +LLSVKW+ Sbjct: 1196 VLLSVKWD 1203>XP_006720006 Length = 1713 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LLLSVKWN 9 +LLSVKW+ Sbjct: 1200 VLLSVKWD 1207>NP_001096080 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LLLSVKW 8 LLL +KW Sbjct: 827 LLLQIKW 833>NP_443135 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LLLSVKW 8 LLL +KW Sbjct: 827 LLLQIKW 833>XP_006725237 Length = 878 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LLLSVKW 8 LLL +KW Sbjct: 681 LLLQIKW 687>XP_005272597 Length = 1025 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LLLSVKW 8 LLL +KW Sbjct: 828 LLLQIKW 834>NP_004220 Length = 1454 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLL VKW Sbjct: 98 RLLALVKW 105>XP_005272757 Length = 1410 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLL VKW Sbjct: 98 RLLALVKW 105>XP_005272756 Length = 1443 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLL VKW Sbjct: 98 RLLALVKW 105>NP_000290 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLLS W+ Sbjct: 705 RLLLSDMWS 713>NP_079029 Length = 1316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LLLSVKW 8 LLL +KW Sbjct: 798 LLLKLKW 804>NP_001005337 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLLS W+ Sbjct: 684 RLLLSDMWS 692>NP_001181 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 R LLSV W Sbjct: 12 RKLLSVPW 19>XP_006712824 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LLLSVKW 8 LLL +KW Sbjct: 798 LLLKLKW 804>YP_003024027 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 LLLSVKWN 9 LLLS WN Sbjct: 228 LLLSRTWN 235>NP_001124339 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLL VKW Sbjct: 311 RLLEYVKW 318>NP_000391 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLL VKW Sbjct: 335 RLLEYVKW 342>NP_005067 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 LSVKWN 9 LS+KW+ Sbjct: 928 LSIKWD 933>NP_001274182 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLLLSVK 7 RLL+SVK Sbjct: 181 RLLISVK 187>NP_001274181 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLLLSVK 7 RLL+SVK Sbjct: 180 RLLISVK 186>NP_001034869 Length = 369 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RLLLSVK 7 RLL+SVK Sbjct: 180 RLLISVK 186>NP_056210 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 +LLLS +W Sbjct: 86 KLLLSDRW 93>NP_001072980 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 RLL+ ++W Sbjct: 83 RLLVGLRW 90>XP_005261554 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 LSVKW 8 LSVKW Sbjct: 33 LSVKW 37>XP_005258696 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLL VKW Sbjct: 311 RLLEYVKW 318>XP_006721008 Length = 149 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 RLL+ ++W Sbjct: 19 RLLVGLRW 26>XP_006721007 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 RLL+ ++W Sbjct: 83 RLLVGLRW 90>XP_005255620 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 RLL+ ++W Sbjct: 83 RLLVGLRW 90>XP_005250571 Length = 823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLLSVKWN 9 LLL V W+ Sbjct: 237 LLLKVSWD 244>XP_005250570 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLLSVKWN 9 LLL V W+ Sbjct: 318 LLLKVSWD 325>XP_005250310 Length = 1165 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 +LLLS +W Sbjct: 86 KLLLSDRW 93>XP_006712341 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLLL + W Sbjct: 16 RLLLLITW 23>XP_006712340 Length = 230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RLLLSVKW 8 RLLL + W Sbjct: 16 RLLLLITW 23>XP_005270830 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 RLL+ ++W Sbjct: 21 RLLVGLRW 28>NP_000729 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RLLLSVKWN 9 RLLL +W+ Sbjct: 430 RLLLLCRWD 438>NP_065930 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLLSVKWN 9 LLL V W+ Sbjct: 369 LLLKVSWD 376>NP_001035799 Length = 272 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RLLLSVKW 8 RLL+ ++W Sbjct: 21 RLLVGLRW 28Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.137 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 530,421 Number of extensions: 775 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |