Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1135 NP_001185763 18 1135 NP_055459 18 1135 XP_006726436 18 1135 XP_006726410 18 1135 XP_006711784 18 1135 XP_006711719 18 1135 XP_006711718 18 1135 XP_006711717 18 1135 XP_006711716 18 1135 XP_006711715 18 1135 XP_006711714 18 1135 XP_006711713 18 1135 XP_006711712 18 1135 XP_006711711 18 1135 XP_006711710 18 1135 XP_006711709 18 1135 XP_005277503 18 1135 XP_005273038 18 1135 XP_006711708 18 1135 XP_005277500 18 1135 XP_006711707 18 1135 XP_005277499 18 1135 XP_006711706 18 1135 XP_006711705 18 1135 XP_006711164 18 1135 XP_005276114 18 1135 XP_006710122 18 1135 XP_006717822 17 3301 XP_006717821 17 3301 XP_005269749 17 3301 XP_006717820 17 3301 NP_065081 17 3301 NP_619520 16 5631 NP_055781 16 5631 XP_006713096 16 5631 XP_006713095 16 5631 NP_005362 16 7355 NP_079436 16 7355 NP_001108585 16 7355 XP_005268930 16 7355 XP_005273330 16 7355 XP_006711880 16 7355 NP_951059 15 9605 NP_060119 15 9605 NP_951058 15 9605 NP_005436 15 9605 NP_001121685 15 9605 NP_001121684 15 9605 NP_064569 15 9605 NP_055991 15 9605 NP_001012734 15 9605 XP_005256258 15 9605 XP_005256256 15 9605 XP_006717971 15 9605 XP_005269990 15 9605 XP_005263972 15 9605 XP_005263971 15 9605 XP_006712405 15 9605 XP_006712404 15 9605 XP_005246413 15 9605 NP_689741 15 9605>NP_001185761 Length = 2240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2174 LELRTKVS 2181>NP_001185763 Length = 2362 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2280 LELRTKVS 2287>NP_055459 Length = 2346 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2280 LELRTKVS 2287>XP_006726436 Length = 178 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 58 LELRTKVS 65>XP_006726410 Length = 2087 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2021 LELRTKVS 2028>XP_006711784 Length = 178 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 58 LELRTKVS 65>XP_006711719 Length = 2302 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2236 LELRTKVS 2243>XP_006711718 Length = 1436 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 1287 LELRTKVS 1294>XP_006711717 Length = 2385 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2236 LELRTKVS 2243>XP_006711716 Length = 2411 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2345 LELRTKVS 2352>XP_006711715 Length = 2428 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2279 LELRTKVS 2286>XP_006711714 Length = 2429 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2280 LELRTKVS 2287>XP_006711713 Length = 2432 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2283 LELRTKVS 2290>XP_006711712 Length = 2473 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2324 LELRTKVS 2331>XP_006711711 Length = 2482 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2333 LELRTKVS 2340>XP_006711710 Length = 2494 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2345 LELRTKVS 2352>XP_006711709 Length = 2495 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2346 LELRTKVS 2353>XP_005277503 Length = 2498 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2443 LELRTKVS 2450>XP_005273038 Length = 2509 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2443 LELRTKVS 2450>XP_006711708 Length = 2512 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2363 LELRTKVS 2370>XP_005277500 Length = 2525 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2443 LELRTKVS 2450>XP_006711707 Length = 2553 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2404 LELRTKVS 2411>XP_005277499 Length = 2561 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2443 LELRTKVS 2450>XP_006711706 Length = 2591 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2442 LELRTKVS 2449>XP_006711705 Length = 2592 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2443 LELRTKVS 2450>XP_006711164 Length = 2087 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 2021 LELRTKVS 2028>XP_005276114 Length = 134 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 28 LELRTKVS 35>XP_006710122 Length = 126 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LELRTKVS 9 LELRTKVS Sbjct: 58 LELRTKVS 65>XP_006717822 Length = 810 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LELRTKV 8 LELRTKV Sbjct: 422 LELRTKV 428>XP_006717821 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LELRTKV 8 LELRTKV Sbjct: 422 LELRTKV 428>XP_005269749 Length = 901 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LELRTKV 8 LELRTKV Sbjct: 422 LELRTKV 428>XP_006717820 Length = 949 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LELRTKV 8 LELRTKV Sbjct: 422 LELRTKV 428>NP_065081 Length = 951 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LELRTKV 8 LELRTKV Sbjct: 422 LELRTKV 428>NP_619520 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLELRTKVS 9 R +L+TKVS Sbjct: 756 RYDLKTKVS 764>NP_055781 Length = 1155 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLELRTKVS 9 R +L+TKVS Sbjct: 717 RYDLKTKVS 725>XP_006713096 Length = 1162 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLELRTKVS 9 R +L+TKVS Sbjct: 724 RYDLKTKVS 732>XP_006713095 Length = 1222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RLELRTKVS 9 R +L+TKVS Sbjct: 784 RYDLKTKVS 792>NP_005362 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LELRTKVS 9 LE+R KVS Sbjct: 106 LEIRVKVS 113>NP_079436 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 ELRTK+S Sbjct: 436 ELRTKMS 442>NP_001108585 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 ELRTK+S Sbjct: 420 ELRTKMS 426>XP_005268930 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LELRTKVS 9 LE+R KVS Sbjct: 63 LEIRVKVS 70>XP_005273330 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 ELRTK+S Sbjct: 436 ELRTKMS 442>XP_006711880 Length = 660 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 ELRTK+S Sbjct: 435 ELRTKMS 441>NP_951059 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 439 LELRTK 444>NP_060119 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 439 LELRTK 444>NP_951058 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 439 LELRTK 444>NP_005436 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 EL+TK+S Sbjct: 276 ELKTKIS 282>NP_001121685 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 392 ELRTKV 397>NP_001121684 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 392 ELRTKV 397>NP_064569 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 366 LELRTK 371>NP_055991 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 284 ELRTKV 289>NP_001012734 Length = 123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RLELRTK 7 R+E+RTK Sbjct: 63 RIEVRTK 69>XP_005256258 Length = 1397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 ELRTK++ Sbjct: 1391 ELRTKIN 1397>XP_005256256 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ELRTKVS 9 ELRTK++ Sbjct: 1421 ELRTKIN 1427>XP_006717971 Length = 559 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 439 LELRTK 444>XP_005269990 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 439 LELRTK 444>XP_005263972 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 366 LELRTK 371>XP_005263971 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LELRTK 7 LELRTK Sbjct: 366 LELRTK 371>XP_006712405 Length = 238 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 154 ELRTKV 159>XP_006712404 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 223 ELRTKV 228>XP_005246413 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 300 ELRTKV 305>NP_689741 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ELRTKV 8 ELRTKV Sbjct: 392 ELRTKV 397Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.131 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 384,396 Number of extensions: 528 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |