Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_005276380 17 3301 XP_005251180 17 3301 XP_005276078 17 3301 NP_940861 16 7355 NP_001243333 16 7355 NP_653294 16 7355 NP_001273424 16 7355 NP_062546 16 7355 XP_005259813 16 7355 XP_005259812 16 7355 XP_006720675 16 7355 XP_006720674 16 7355 XP_006720672 16 7355 XP_005254605 16 7355 XP_005254604 16 7355 NP_001073991 15 9605 NP_598328 15 9605 NP_000099 15 9605 NP_060136 15 9605 NP_001276680 15 9605 NP_001254708 15 9605 NP_001156863 15 9605 NP_001276679 15 9605 NP_001276681 15 9605 NP_859074 15 9605 NP_001129246 15 9605 NP_001180481 15 9605 NP_008881 15 9605 NP_071904 15 9605 NP_001803 15 9605 NP_065996 15 9605 XP_006724828 15 9605 XP_006723248 15 9605 XP_005258914 15 9605 XP_005258915 15 9605 XP_005266561 15 9605 XP_005266560 15 9605 XP_005266559 15 9605 XP_005270064 15 9605 XP_005270062 15 9605 XP_005270061 15 9605 XP_005273535 15 9605 XP_006716393 15 9605 XP_006716392 15 9605 XP_006716391 15 9605 XP_005273534 15 9605 XP_006715347 15 9605 XP_006715346 15 9605 XP_006715345 15 9605 XP_006714128 15 9605 XP_006714127 15 9605 XP_005248234 15 9605 XP_006713376 15 9605 XP_006713375 15 9605 NP_003481 15 9605>XP_005276380 Length = 232 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 RKSF SRS Sbjct: 27 RKSFLSRS 34>XP_005251180 Length = 229 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 RKSF SRS Sbjct: 27 RKSFLSRS 34>XP_005276078 Length = 232 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 RKSF SRS Sbjct: 27 RKSFLSRS 34>NP_940861 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKSFASRSI 9 RKS SRS+ Sbjct: 796 RKSHTSRSV 804>NP_001243333 Length = 928 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKSFASRSI 9 RKS SRS+ Sbjct: 853 RKSHTSRSV 861>NP_653294 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 187 KSFSSRS 193>NP_001273424 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 848 KSFSSRS 854>NP_062546 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005259813 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 116 KSFSSRS 122>XP_005259812 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 187 KSFSSRS 193>XP_006720675 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 753 KSFSSRS 759>XP_006720674 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 753 KSFSSRS 759>XP_006720672 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005254605 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 841 KSFSSRS 847>XP_005254604 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 KSF+SRS Sbjct: 841 KSFSSRS 847>NP_001073991 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSFASRSI 9 KSF SRS+ Sbjct: 1463 KSFFSRSL 1470>NP_598328 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKSFAS 6 RKSFAS Sbjct: 573 RKSFAS 578>NP_000099 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KSFASRSI 9 K FASR I Sbjct: 104 KDFASRGI 111>NP_060136 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 RKS ASRS Sbjct: 553 RKSNASRS 560>NP_001276680 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KSFASRSI 9 K FASR I Sbjct: 81 KDFASRGI 88>NP_001254708 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 536 KSFTSRS 542Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 816 KSFTSRS 822>NP_001156863 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSFASRSI 9 KSF+ RSI Sbjct: 393 KSFSRRSI 400>NP_001276679 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KSFASRSI 9 K FASR I Sbjct: 5 KDFASRGI 12>NP_001276681 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KSFASRSI 9 K FASR I Sbjct: 104 KDFASRGI 111>NP_859074 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SFASRSI 9 +FASRSI Sbjct: 447 NFASRSI 453>NP_001129246 Length = 579 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKSFAS 6 RKSFAS Sbjct: 570 RKSFAS 575>NP_001180481 Length = 1090 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 568 KSFTSRS 574Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 848 KSFTSRS 854>NP_008881 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKSFAS 6 RKSFAS Sbjct: 696 RKSFAS 701>NP_071904 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 K FASRS Sbjct: 731 KQFASRS 737>NP_001803 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 +SFASRS Sbjct: 310 QSFASRS 316>NP_065996 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 +KS ASRS Sbjct: 2179 KKSLASRS 2186>XP_006724828 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 RKS ASRS Sbjct: 504 RKSNASRS 511>XP_006723248 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 538 KSFTSRS 544Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 818 KSFTSRS 824>XP_005258914 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 570 KSFTSRS 576Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 850 KSFTSRS 856>XP_005258915 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 570 KSFTSRS 576Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 KSF SRS Sbjct: 850 KSFTSRS 856>XP_005266561 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 K FASRS Sbjct: 441 KQFASRS 447>XP_005266560 Length = 1037 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 K FASRS Sbjct: 731 KQFASRS 737>XP_005266559 Length = 1077 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KSFASRS 8 K FASRS Sbjct: 657 KQFASRS 663>XP_005270064 Length = 1615 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 +KS ASRS Sbjct: 610 KKSLASRS 617>XP_005270062 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 +KS ASRS Sbjct: 2179 KKSLASRS 2186>XP_005270061 Length = 3184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKSFASRS 8 +KS ASRS Sbjct: 2179 KKSLASRS 2186>XP_005273535 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SFASRSI 9 +FASRSI Sbjct: 271 NFASRSI 277>XP_006716393 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SFASRSI 9 +FASRSI Sbjct: 324 NFASRSI 330>XP_006716392 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SFASRSI 9 +FASRSI Sbjct: 402 NFASRSI 408>XP_006716391 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SFASRSI 9 +FASRSI Sbjct: 415 NFASRSI 421>XP_005273534 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SFASRSI 9 +FASRSI Sbjct: 434 NFASRSI 440>XP_006715347 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSFASRSI 9 KSF+ RSI Sbjct: 393 KSFSRRSI 400>XP_006715346 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSFASRSI 9 KSF+ RSI Sbjct: 393 KSFSRRSI 400>XP_006715345 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSFASRSI 9 KSF+ RSI Sbjct: 393 KSFSRRSI 400>XP_006714128 Length = 730 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 +SFASRS Sbjct: 97 QSFASRS 103>XP_006714127 Length = 935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KSFASRS 8 +SFASRS Sbjct: 310 QSFASRS 316>XP_005248234 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KSFASRSI 9 KSF SRS+ Sbjct: 1463 KSFFSRSL 1470>XP_006713376 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKSFAS 6 RKSFAS Sbjct: 316 RKSFAS 321>XP_006713375 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKSFAS 6 RKSFAS Sbjct: 412 RKSFAS 417>NP_003481 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKSFAS 6 RKSFAS Sbjct: 571 RKSFAS 576Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.123 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 327,398 Number of extensions: 674 Number of successful extensions: 60 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |