Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689865 17 3301 NP_001201838 17 3301 NP_001201836 17 3301 NP_001139806 17 3301 NP_055058 17 3301 XP_006715737 17 3301 NP_001201835 17 3301 NP_001258975 16 5631 NP_055213 16 7355 NP_003368 16 7355 NP_003096 16 7355 XP_005276414 16 7355 XP_005252387 16 7355 XP_006713649 16 7355 XP_005247417 16 7355 XP_005276088 16 7355 NP_001153685 16 7355 NP_757386 15 9605 NP_001274370 15 9605 NP_955352 15 9605 NP_079176 15 9605 NP_001274371 15 9605 NP_001274368 15 9605 NP_001274372 15 9605 NP_001274366 15 9605 NP_001274369 15 9605 NP_055938 15 9605 NP_065955 15 9605 NP_001154826 15 9605 NP_003021 15 9605 NP_065770 15 9605 XP_006723364 15 9605 XP_005259166 15 9605 XP_005259165 15 9605 XP_005259164 15 9605 XP_005260059 15 9605 XP_005263289 15 9605 XP_006714373 15 9605 XP_005263286 15 9605 XP_006713790 15 9605 XP_005264780 15 9605 XP_006713127 15 9605 XP_006713126 15 9605 XP_005264779 15 9605 XP_005264778 15 9605 XP_005264777 15 9605>NP_689865 Length = 618 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RKPTRAAT 8 R+P+RAAT Sbjct: 255 RQPSRAAT 262>NP_001201838 Length = 618 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RKPTRAAT 8 R+P+RAAT Sbjct: 255 RQPSRAAT 262>NP_001201836 Length = 495 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RKPTRAAT 8 R+P+RAAT Sbjct: 132 RQPSRAAT 139>NP_001139806 Length = 1562 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKPTRAATV 9 RKP AAT+ Sbjct: 577 RKPVAAATI 585>NP_055058 Length = 1205 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RKPTRAATV 9 R+PTR++T+ Sbjct: 1195 RRPTRSSTL 1203>XP_006715737 Length = 1349 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKPTRAATV 9 RKP AAT+ Sbjct: 577 RKPVAAATI 585>NP_001201835 Length = 618 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RKPTRAAT 8 R+P+RAAT Sbjct: 255 RQPSRAAT 262>NP_001258975 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KPTRAA 7 KPTRAA Sbjct: 588 KPTRAA 593>NP_055213 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KPTRAATV 9 +PT AATV Sbjct: 38 QPTAAATV 45>NP_003368 Length = 207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KP RAAT Sbjct: 134 KPDRAAT 140>NP_003096 Length = 2214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKPTRAA 7 RKP RAA Sbjct: 332 RKPMRAA 338>XP_005276414 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKPTRAATV 9 R+P RAA V Sbjct: 128 RRPPRAAPV 136>XP_005252387 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKPTRAATV 9 R+P RAA V Sbjct: 128 RRPPRAAPV 136>XP_006713649 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KPTRAATV 9 +PT AATV Sbjct: 14 QPTAAATV 21>XP_005247417 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KPTRAATV 9 +PT AATV Sbjct: 38 QPTAAATV 45>XP_005276088 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKPTRAATV 9 R+P RAA V Sbjct: 128 RRPPRAAPV 136>NP_001153685 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RKPTRAAT 8 R+PTRA++ Sbjct: 779 REPTRASS 786>NP_757386 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KPTRAATV 9 KP AATV Sbjct: 372 KPASAATV 379>NP_001274370 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_955352 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_079176 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_001274371 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_001274368 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_001274372 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_001274366 Length = 830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 257 KPTRSGT 263>NP_001274369 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>NP_055938 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 561 KKPSQKATV 569>NP_065955 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 +KPTRA Sbjct: 28 KKPTRA 33>NP_001154826 Length = 583 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 +KPTRA Sbjct: 28 KKPTRA 33>NP_003021 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 RKPT+A Sbjct: 118 RKPTKA 123>NP_065770 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 RKPT+A Sbjct: 1157 RKPTKA 1162>XP_006723364 Length = 637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 +KPTRA Sbjct: 28 KKPTRA 33>XP_005259166 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 +KPTRA Sbjct: 28 KKPTRA 33>XP_005259165 Length = 662 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 +KPTRA Sbjct: 28 KKPTRA 33>XP_005259164 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 +KPTRA Sbjct: 28 KKPTRA 33>XP_005260059 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 KPTRAATV 9 KP AATV Sbjct: 162 KPASAATV 169>XP_005263289 Length = 842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 269 KPTRSGT 275>XP_006714373 Length = 857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 284 KPTRSGT 290>XP_005263286 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 KPTRAAT 8 KPTR+ T Sbjct: 296 KPTRSGT 302>XP_006713790 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RKPTRA 6 RKPT+A Sbjct: 118 RKPTKA 123>XP_005264780 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 213 KKPSQKATV 221>XP_006713127 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 272 KKPSQKATV 280>XP_006713126 Length = 980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 507 KKPSQKATV 515>XP_005264779 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 516 KKPSQKATV 524>XP_005264778 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 528 KKPSQKATV 536>XP_005264777 Length = 1003 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKPTRAATV 9 +KP++ ATV Sbjct: 530 KKPSQKATV 538Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.119 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 669,566 Number of extensions: 719 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |