Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_055668 17 3301 XP_006721677 17 3301 XP_006721676 17 3301 NP_001091979 17 3301 NP_056475 17 4312 NP_079239 17 4312 NP_001128523 17 4312 NP_065991 17 4312 NP_001139681 17 4312 NP_001230713 17 4312 NP_001137311 17 4312 NP_002590 17 4312 NP_001243496 17 4312 NP_000691 17 4312 NP_005679 17 4312 NP_000741 17 4312 NP_001138740 17 4312 NP_542141 17 4312 NP_112598 17 4312 XP_005260338 17 4312 XP_005274097 17 4312 XP_006715959 17 4312 XP_005249911 17 4312 XP_005249910 17 4312 XP_005247116 17 4312 XP_005247115 17 4312 NP_570115 16 5631 NP_061738 16 5631 NP_114398 16 5631 NP_001253981 16 5631 XP_005258187 16 5631 XP_005257983 16 5631 NP_001073678 16 5631 NP_775259 16 5631 NP_001028748 16 5631 NP_620598 16 7355 NP_620599 16 7355 NP_004348 16 7355 NP_001034579 16 7355 NP_037365 16 7355 NP_005100 16 7355 NP_689607 16 7355 NP_002449 16 7355 NP_891992 16 7355 XP_005247176 16 7355 XP_006713561 16 7355 XP_005265695 16 7355 XP_005246523 16 7355 XP_005246522 16 7355 NP_001004745 16 7355 NP_001004746 16 7355 NP_060661 15 9605 NP_001123989 15 9605 NP_001013454 15 9605 NP_066949 15 9605 NP_005754 15 9605 NP_004362 15 9605 NP_001091868 15 9605 NP_001009905 15 9605 NP_002423 15 9605 XP_006726603 15 9605 XP_006725352 15 9605 XP_006725215 15 9605 XP_005261667 15 9605 XP_006722336 15 9605 XP_006722335 15 9605 XP_005256248 15 9605 XP_005266498 15 9605 XP_006719237 15 9605 NP_113678 15 9605>NP_055668 Length = 1051 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 ++ALCGA Sbjct: 40 IIALCGA 46>XP_006721677 Length = 1028 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 ++ALCGA Sbjct: 40 IIALCGA 46>XP_006721676 Length = 1073 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 ++ALCGA Sbjct: 40 IIALCGA 46>NP_001091979 Length = 1006 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 ++ALCGA Sbjct: 40 IIALCGA 46>NP_056475 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KLVALCG 8 KLVA CG Sbjct: 170 KLVAACG 176>NP_079239 Length = 718 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKL ALC Sbjct: 57 RKLAALC 63>NP_001128523 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 +KL+ LCG Sbjct: 133 QKLIRLCG 140>NP_065991 Length = 765 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 +KL+ LCG Sbjct: 133 QKLIRLCG 140>NP_001139681 Length = 932 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 RK++ LCG Sbjct: 219 RKILQLCG 226>NP_001230713 Length = 920 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 RK++ LCG Sbjct: 207 RKILQLCG 214>NP_001137311 Length = 934 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 RK++ LCG Sbjct: 221 RKILQLCG 228>NP_002590 Length = 941 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 RK++ LCG Sbjct: 228 RKILQLCG 235>NP_001243496 Length = 231 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVALCG 8 LVALCG Sbjct: 12 LVALCG 17>NP_000691 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVALCG 8 LVALCG Sbjct: 339 LVALCG 344>NP_005679 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLVALCGA 9 KLV +CG+ Sbjct: 589 KLVGICGS 596>NP_000741 Length = 498 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LVALCG 8 LVALCG Sbjct: 12 LVALCG 17>NP_001138740 Length = 392 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 R LVA+CG Sbjct: 100 RVLVAVCG 107>NP_542141 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KLVALCG 8 KLV LCG Sbjct: 6 KLVLLCG 12>NP_112598 Length = 5088 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RKLVALC 7 R+LVALC Sbjct: 1484 RELVALC 1490>XP_005260338 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KLVALCG 8 KLV LCG Sbjct: 6 KLVLLCG 12>XP_005274097 Length = 940 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 RK++ LCG Sbjct: 227 RKILQLCG 234>XP_006715959 Length = 385 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 R LVA+CG Sbjct: 100 RVLVAVCG 107>XP_005249911 Length = 672 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKL ALC Sbjct: 57 RKLAALC 63>XP_005249910 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKL ALC Sbjct: 57 RKLAALC 63>XP_005247116 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLVALCGA 9 KLV +CG+ Sbjct: 589 KLVGICGS 596>XP_005247115 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLVALCGA 9 KLV +CG+ Sbjct: 589 KLVGICGS 596>NP_570115 Length = 306 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 R+LVA CG Sbjct: 175 RELVAECG 182>NP_061738 Length = 932 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKLV LC Sbjct: 11 RKLVLLC 17>NP_114398 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKLV LC Sbjct: 11 RKLVLLC 17>NP_001253981 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 +VALCG+ Sbjct: 426 MVALCGS 432>XP_005258187 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVALCG 8 L+ALCG Sbjct: 54 LIALCG 59>XP_005257983 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 +VALCG+ Sbjct: 426 MVALCGS 432>NP_001073678 Length = 621 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LVALCG 8 L+ALCG Sbjct: 54 LIALCG 59>NP_775259 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 +VALCG+ Sbjct: 426 MVALCGS 432>NP_001028748 Length = 929 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 +VALCG+ Sbjct: 426 MVALCGS 432>NP_620598 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 + +VALCG Sbjct: 186 KTVVALCG 193>NP_620599 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 + +VALCG Sbjct: 186 KTVVALCG 193>NP_004348 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 + +VALCG Sbjct: 186 KTVVALCG 193>NP_001034579 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 + +VALCG Sbjct: 186 KTVVALCG 193>NP_037365 Length = 545 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RKLVALC 7 RKL++LC Sbjct: 311 RKLLSLC 317>NP_005100 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RKLVALC 7 RK+++LC Sbjct: 265 RKMISLC 271>NP_689607 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLVALC 7 KL+ALC Sbjct: 637 KLIALC 642>NP_002449 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LVALCGA 9 L+A+CG+ Sbjct: 1285 LIAICGS 1291>NP_891992 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RKLVALCG 8 RK++A CG Sbjct: 17 RKVLAKCG 24>XP_005247176 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLVALC 7 KL+ALC Sbjct: 491 KLIALC 496>XP_006713561 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLVALC 7 KL+ALC Sbjct: 590 KLIALC 595>XP_005265695 Length = 460 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 RKLVALC 7 RK+++LC Sbjct: 198 RKMISLC 204>XP_005246523 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RKLVALC 7 RKL++LC Sbjct: 147 RKLLSLC 153>XP_005246522 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RKLVALC 7 RKL++LC Sbjct: 311 RKLLSLC 317>NP_001004745 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 RK+ + CGA Sbjct: 247 RKVFSTCGA 255>NP_001004746 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 RK+ + CGA Sbjct: 274 RKVFSTCGA 282>NP_060661 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RKLVALCG 8 +KL LCG Sbjct: 66 KKLEGLCG 73>NP_001123989 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 + LVA CG+ Sbjct: 242 KPLVATCGS 250>NP_001013454 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 + LVA CG+ Sbjct: 242 KPLVATCGS 250>NP_066949 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 + LVA CG+ Sbjct: 262 KPLVATCGS 270>NP_005754 Length = 926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 KLVALC 7 KLVA+C Sbjct: 348 KLVAIC 353>NP_004362 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKL ALC Sbjct: 516 RKLDALC 522>NP_001091868 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RKL ALC Sbjct: 525 RKLDALC 531>NP_001009905 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RK+VA C Sbjct: 286 RKVVAFC 292>NP_002423 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 RKL +CG+ Sbjct: 379 RKLKLVCGS 387>XP_006726603 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LVALCG 8 L+A+CG Sbjct: 1059 LIAICG 1064>XP_006725352 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RK+VA C Sbjct: 271 RKVVAFC 277>XP_006725215 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LVALCG 8 L+A+CG Sbjct: 1059 LIAICG 1064>XP_005261667 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 + LVA CG+ Sbjct: 242 KPLVATCGS 250>XP_006722336 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RK+VA C Sbjct: 271 RKVVAFC 277>XP_006722335 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RKLVALC 7 RK+VA C Sbjct: 286 RKVVAFC 292>XP_005256248 Length = 808 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 RKL A+C A Sbjct: 522 RKLGAICRA 530>XP_005266498 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RKLVALCG 8 +KL LCG Sbjct: 66 KKLEGLCG 73>XP_006719237 Length = 1263 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 LVALCG 8 L+A+CG Sbjct: 1059 LIAICG 1064>NP_113678 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKLVALCGA 9 RKL A+C A Sbjct: 566 RKLGAICRA 574Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.143 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 601,269 Number of extensions: 683 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |