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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004680                                                              16    5631
NP_000978                                                              16    7355
NP_001004334                                                           16    7355
NP_079416                                                              16    7355
XP_005256807                                                           16    7355
XP_005256806                                                           16    7355
XP_005253682                                                           16    7355
XP_006719674                                                           16    7355
XP_005253681                                                           16    7355
XP_005265980                                                           16    7355
XP_005265979                                                           16    7355
XP_005265978                                                           16    7355
NP_057177                                                              16    7355
NP_001273433                                                           15    9605
NP_001273432                                                           15    9605
NP_006635                                                              15    9605
NP_001273434                                                           15    9605
XP_006719820                                                           15    9605
XP_005266293                                                           15    9605

>NP_004680
          Length = 715

 Score = 16.2 bits (30), Expect =  5631
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           RKL+SSS T
Sbjct: 669 RKLLSSSET 677



>NP_000978
          Length = 145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 27 RKIMSSPLS 35



>NP_001004334
          Length = 2367

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   RKLMSSSL 8
           R+L+SSSL
Sbjct: 752 RRLLSSSL 759



>NP_079416
          Length = 331

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSSS T
Sbjct: 167 KKLMSSSGT 175



>XP_005256807
          Length = 145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 27 RKIMSSPLS 35



>XP_005256806
          Length = 145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 27 RKIMSSPLS 35



>XP_005253682
          Length = 331

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSSS T
Sbjct: 167 KKLMSSSGT 175



>XP_006719674
          Length = 331

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSSS T
Sbjct: 167 KKLMSSSGT 175



>XP_005253681
          Length = 331

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSSS T
Sbjct: 167 KKLMSSSGT 175



>XP_005265980
          Length = 145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 27 RKIMSSPLS 35



>XP_005265979
          Length = 145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 27 RKIMSSPLS 35



>XP_005265978
          Length = 174

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 56 RKIMSSPLS 64



>NP_057177
          Length = 145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RKLMSSSLT 9
          RK+MSS L+
Sbjct: 27 RKIMSSPLS 35



>NP_001273433
          Length = 860

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSS+ T
Sbjct: 276 KKLMSSNST 284



>NP_001273432
          Length = 814

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSS+ T
Sbjct: 274 KKLMSSNST 282



>NP_006635
          Length = 858

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSS+ T
Sbjct: 274 KKLMSSNST 282



>NP_001273434
          Length = 782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSS+ T
Sbjct: 198 KKLMSSNST 206



>XP_006719820
          Length = 913

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSS+ T
Sbjct: 329 KKLMSSNST 337



>XP_005266293
          Length = 816

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   RKLMSSSLT 9
           +KLMSS+ T
Sbjct: 276 KKLMSSNST 284



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.309    0.111    0.245 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 291,800
Number of extensions: 697
Number of successful extensions: 19
Number of sequences better than 10000.0: 19
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 19
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)