Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_001070650 17 2528 NP_036550 17 2528 NP_443132 17 2528 NP_937757 17 2528 NP_937756 17 2528 XP_005257253 17 2528 XP_005257252 17 2528 NP_057715 16 5631 NP_037461 16 5631 NP_073616 16 5631 XP_006724130 16 5631 XP_006724129 16 5631 XP_006717299 16 5631 XP_005272265 16 5631 XP_005272264 16 5631 XP_005272263 16 5631 NP_619526 16 5631 NP_116196 16 7355 NP_835363 16 7355 NP_001245381 16 7355 NP_001245382 16 7355 NP_001138766 16 7355 NP_001138767 16 7355 NP_060767 16 7355 NP_001138765 16 7355 NP_003120 16 7355 XP_006717580 16 7355 XP_006717579 16 7355 XP_005265374 16 7355 XP_005265373 16 7355 NP_003822 16 7355 NP_002931 16 7355 NP_001035809 16 7355 NP_001278340 15 9605 NP_620305 15 9605 NP_001230111 15 9605 NP_000044 15 9605 NP_001005918 15 9605 NP_001230217 15 9605 NP_115571 15 9605 NP_001177396 15 9605 NP_056540 15 9605 NP_114141 15 9605 NP_056295 15 9605 NP_001230215 15 9605 NP_001681 15 9605 XP_006724107 15 9605 XP_006724106 15 9605 XP_005266488 15 9605 XP_006719902 15 9605 XP_006719901 15 9605 XP_005266489 15 9605 XP_005266487 15 9605 XP_005266486 15 9605 XP_005266485 15 9605 XP_005266484 15 9605 XP_006719900 15 9605 XP_005266480 15 9605 XP_005266481 15 9605 XP_005268766 15 9605 XP_005247379 15 9605 XP_005247378 15 9605 NP_001408 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 2642 RKGINIPAD 2650>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 1294 RKGINIPAD 1302>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 2294 RKGINIPAD 2302>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 2636 RKGINIPAD 2644>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 2642 RKGINIPAD 2650>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 2642 RKGINIPAD 2650>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 RKGINI AD Sbjct: 2642 RKGINIPAD 2650>NP_001070650 Length = 516 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RKGINISAD 9 R+G+N+SA+ Sbjct: 274 RQGVNVSAN 282>NP_036550 Length = 492 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RKGINISAD 9 R+G+N+SA+ Sbjct: 274 RQGVNVSAN 282>NP_443132 Length = 3538 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGINISA Sbjct: 1173 KGINISA 1179>NP_937757 Length = 3667 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGINISA Sbjct: 1237 KGINISA 1243>NP_937756 Length = 3707 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGINISA Sbjct: 1277 KGINISA 1283>XP_005257253 Length = 492 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RKGINISAD 9 R+G+N+SA+ Sbjct: 274 RQGVNVSAN 282>XP_005257252 Length = 516 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RKGINISAD 9 R+G+N+SA+ Sbjct: 274 RQGVNVSAN 282>NP_057715 Length = 917 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 318 RKGINI 323>NP_037461 Length = 815 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 318 RKGINI 323>NP_073616 Length = 851 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 354 RKGINI 359>XP_006724130 Length = 757 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 318 RKGINI 323>XP_006724129 Length = 882 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 318 RKGINI 323>XP_006717299 Length = 691 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 354 RKGINI 359>XP_005272265 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 225 RKGINI 230>XP_005272264 Length = 755 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 258 RKGINI 263>XP_005272263 Length = 778 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 354 RKGINI 359>NP_619526 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RKGINI 6 RKGINI Sbjct: 354 RKGINI 359>NP_116196 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 448 KGINIS 453>NP_835363 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 397 KGINIS 402>NP_001245381 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 323 KGINIS 328>NP_001245382 Length = 969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 323 KGINIS 328>NP_001138766 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 177 KGINIS 182>NP_001138767 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 219 KGINIS 224>NP_060767 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 219 KGINIS 224>NP_001138765 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 219 KGINIS 224>NP_003120 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RKGINIS 7 RKG NIS Sbjct: 99 RKGTNIS 105>XP_006717580 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 397 KGINIS 402>XP_006717579 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 534 KGINIS 539>XP_005265374 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 219 KGINIS 224>XP_005265373 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KGINIS 7 KGINIS Sbjct: 219 KGINIS 224>NP_003822 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GINISAD 9 G+NI+AD Sbjct: 470 GLNITAD 476>NP_002931 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R+GINI D Sbjct: 306 REGINIFLD 314>NP_001035809 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R+GINI D Sbjct: 306 REGINIFLD 314>NP_001278340 Length = 2108 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGIN+S+ Sbjct: 1485 KGINLSS 1491>NP_620305 Length = 2426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGIN+S+ Sbjct: 1485 KGINLSS 1491>NP_001230111 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1045 RNGLTISSD 1053>NP_000044 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1156 RNGLTISSD 1164>NP_001005918 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 949 RNGLTISSD 957>NP_001230217 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 RKG+N+ + Sbjct: 261 RKGVNLKCN 269>NP_115571 Length = 2303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGIN+S+ Sbjct: 1485 KGINLSS 1491>NP_001177396 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RKGINISAD 9 +KG+ ISA+ Sbjct: 131 QKGLRISAE 139>NP_056540 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RKGINISA 8 R+GIN++A Sbjct: 16 REGINMAA 23>NP_114141 Length = 5635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KGINISAD 9 KG+ I+AD Sbjct: 5134 KGLTIAAD 5141>NP_056295 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 RKG+N+ + Sbjct: 284 RKGVNLKCN 292>NP_001230215 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 RKG+N+ + Sbjct: 284 RKGVNLKCN 292>NP_001681 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 KGINISA 8 +G+N+SA Sbjct: 120 RGVNVSA 126>XP_006724107 Length = 2298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGIN+S+ Sbjct: 1485 KGINLSS 1491>XP_006724106 Length = 2459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 KGIN+S+ Sbjct: 1485 KGINLSS 1491>XP_005266488 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1144 RNGLTISSD 1152>XP_006719902 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 367 RNGLTISSD 375>XP_006719901 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 428 RNGLTISSD 436>XP_005266489 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 994 RNGLTISSD 1002>XP_005266487 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1156 RNGLTISSD 1164>XP_005266486 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1046 RNGLTISSD 1054>XP_005266485 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1072 RNGLTISSD 1080>XP_005266484 Length = 1387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1078 RNGLTISSD 1086>XP_006719900 Length = 1433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1124 RNGLTISSD 1132>XP_005266480 Length = 1433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1124 RNGLTISSD 1132>XP_005266481 Length = 1433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 R G+ IS+D Sbjct: 1124 RNGLTISSD 1132>XP_005268766 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 +G+NISA Sbjct: 117 RGLNISA 123>XP_005247379 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 RKG+N+ + Sbjct: 284 RKGVNLKCN 292>XP_005247378 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 RKGINISAD 9 RKG+N+ + Sbjct: 261 RKGVNLKCN 269>NP_001408 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KGINISA 8 +G+NISA Sbjct: 117 RGLNISA 123Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.134 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,814 Number of extensions: 656 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |