Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001257436 20 390 NP_001257437 20 390 NP_006281 20 390 XP_005267176 20 390 NP_057692 17 3301 NP_258428 16 5631 NP_004288 15 9605 NP_001193940 15 9605 NP_835471 15 9605 NP_001269221 15 9605 NP_009119 15 9605 NP_001269220 15 9605 NP_671693 15 9605 NP_001833 15 9605 NP_001269222 15 9605 XP_006716783 15 9605 XP_005251420 15 9605 XP_005251419 15 9605 XP_006713692 15 9605 XP_006713691 15 9605 XP_006713690 15 9605 XP_006713689 15 9605 XP_006713688 15 9605 XP_006713687 15 9605>NP_001257436 Length = 790 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RKALFSTIK 9 RKALFST+K Sbjct: 123 RKALFSTLK 131>NP_001257437 Length = 790 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RKALFSTIK 9 RKALFST+K Sbjct: 123 RKALFSTLK 131>NP_006281 Length = 790 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RKALFSTIK 9 RKALFST+K Sbjct: 123 RKALFSTLK 131>XP_005267176 Length = 790 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RKALFSTIK 9 RKALFST+K Sbjct: 123 RKALFSTLK 131>NP_057692 Length = 453 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 KALFSTIK 9 KALF+T+K Sbjct: 109 KALFNTLK 116>NP_258428 Length = 779 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RKALFSTI 8 RKALF T+ Sbjct: 423 RKALFGTM 430>NP_004288 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 KALFSTI 8 KALF TI Sbjct: 248 KALFKTI 254>NP_001193940 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LFSTIK 9 LFSTIK Sbjct: 171 LFSTIK 176>NP_835471 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 81 KALFST 86>NP_001269221 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RKALFSTI 8 R+ALFS++ Sbjct: 211 RRALFSSL 218>NP_009119 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RKALFSTI 8 R+ALFS++ Sbjct: 211 RRALFSSL 218>NP_001269220 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RKALFSTI 8 R+ALFS++ Sbjct: 228 RRALFSSL 235>NP_671693 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LFSTIK 9 LFSTIK Sbjct: 171 LFSTIK 176>NP_001833 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LFSTIK 9 LFSTIK Sbjct: 171 LFSTIK 176>NP_001269222 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RKALFSTI 8 R+ALFS++ Sbjct: 123 RRALFSSL 130>XP_006716783 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LFSTIK 9 LFSTIK Sbjct: 171 LFSTIK 176>XP_005251420 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LFSTIK 9 LFSTIK Sbjct: 171 LFSTIK 176>XP_005251419 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LFSTIK 9 LFSTIK Sbjct: 171 LFSTIK 176>XP_006713692 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 118 KALFST 123>XP_006713691 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 118 KALFST 123>XP_006713690 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 212 KALFST 217>XP_006713689 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 212 KALFST 217>XP_006713688 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 212 KALFST 217>XP_006713687 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KALFST 7 KALFST Sbjct: 212 KALFST 217Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.134 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 338,145 Number of extensions: 328 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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