Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004324                                                              19     869
NP_002871                                                              19     869
XP_005250103                                                           19     869
XP_005250102                                                           19     869
XP_005265417                                                           19     869
XP_005265416                                                           19     869
XP_005265415                                                           19     869
XP_005265414                                                           19     869
XP_005265412                                                           19     869
NP_001243125                                                           18    1935
NP_001645                                                              18    1935
XP_006724592                                                           18    1935
NP_079076                                                              17    3301
NP_665917                                                              17    3301
NP_001139475                                                           17    3301
XP_006713813                                                           17    3301
XP_005247842                                                           17    3301
XP_005247840                                                           17    3301
NP_001885                                                              16    7355
NP_689407                                                              16    7355
NP_004657                                                              16    7355
NP_001186329                                                           16    7355
NP_660204                                                              16    7355
NP_001186327                                                           16    7355
NP_001186326                                                           16    7355
NP_001186328                                                           16    7355
NP_001276841                                                           16    7355
NP_001020276                                                           16    7355
NP_036356                                                              16    7355
NP_056053                                                              16    7355
NP_849143                                                              16    7355
NP_001229279                                                           16    7355
NP_511043                                                              16    7355
NP_004656                                                              16    7355
NP_001258670                                                           16    7355
NP_001883                                                              16    7355
NP_001884                                                              16    7355
NP_620693                                                              16    7355
NP_001155134                                                           16    7355
NP_001155133                                                           16    7355
XP_005256394                                                           16    7355
XP_005256393                                                           16    7355
XP_006715656                                                           16    7355
XP_006714899                                                           16    7355
XP_005265910                                                           16    7355
XP_006714898                                                           16    7355
XP_005265909                                                           16    7355
XP_005265908                                                           16    7355
XP_005265907                                                           16    7355
XP_006714291                                                           16    7355
XP_006714290                                                           16    7355
NP_005430                                                              16    7355
NP_976035                                                              15    9605
NP_110380                                                              15    9605
NP_002309                                                              15    9605
NP_005219                                                              15    9605
NP_001167639                                                           15    9605
NP_001036064                                                           15    9605
NP_060058                                                              15    9605
NP_001167638                                                           15    9605
NP_001128524                                                           15    9605
NP_003168                                                              15    9605
NP_438172                                                              15    9605
NP_005226                                                              15    9605
NP_149122                                                              15    9605
NP_079321                                                              15    9605
NP_848549                                                              15    9605
NP_001243326                                                           15    9605
NP_001276866                                                           15    9605
NP_004439                                                              15    9605
NP_001276865                                                           15    9605
NP_001005862                                                           15    9605
NP_059125                                                              15    9605
NP_001032367                                                           15    9605
NP_001243329                                                           15    9605
NP_001243327                                                           15    9605
NP_114144                                                              15    9605
NP_061760                                                              15    9605
XP_005261808                                                           15    9605
XP_005259076                                                           15    9605
XP_005257197                                                           15    9605
XP_006721828                                                           15    9605
XP_006717367                                                           15    9605
XP_005252204                                                           15    9605
XP_005272220                                                           15    9605
XP_005249548                                                           15    9605
XP_005246434                                                           15    9605
XP_005246433                                                           15    9605
XP_005246432                                                           15    9605
XP_006712427                                                           15    9605
XP_006710425                                                           15    9605
XP_006710424                                                           15    9605
XP_005270526                                                           15    9605
XP_005270527                                                           15    9605
NP_060178                                                              15    9605
>NP_004324
          Length = 766

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 462 RIGSGSFGT 470
>NP_002871
          Length = 648

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 354 RIGSGSFGT 362
>XP_005250103
          Length = 758

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 462 RIGSGSFGT 470
>XP_005250102
          Length = 767

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 462 RIGSGSFGT 470
>XP_005265417
          Length = 494

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 354 RIGSGSFGT 362
>XP_005265416
          Length = 534

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 240 RIGSGSFGT 248
>XP_005265415
          Length = 567

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 273 RIGSGSFGT 281
>XP_005265414
          Length = 615

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 321 RIGSGSFGT 329
>XP_005265412
          Length = 648

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI SGSFGT
Sbjct: 354 RIGSGSFGT 362
>NP_001243125
          Length = 609

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI +GSFGT
Sbjct: 318 RIGTGSFGT 326
>NP_001645
          Length = 606

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI +GSFGT
Sbjct: 315 RIGTGSFGT 323
>XP_006724592
          Length = 611

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   RIVSGSFGT 9
           RI +GSFGT
Sbjct: 320 RIGTGSFGT 328
>NP_079076
          Length = 645

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RIVSGSFGT 9
          ++ SGSFGT
Sbjct: 34 KLGSGSFGT 42
>NP_665917
          Length = 470

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RIVSGSFGT 9
          ++ SGSFGT
Sbjct: 34 KLGSGSFGT 42
>NP_001139475
          Length = 599

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RIVSGSFGT 9
          ++ SGSFGT
Sbjct: 34 KLGSGSFGT 42
>XP_006713813
          Length = 482

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RIVSGSFGT 9
          ++ SGSFGT
Sbjct: 34 KLGSGSFGT 42
>XP_005247842
          Length = 540

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RIVSGSFGT 9
          ++ SGSFGT
Sbjct: 34 KLGSGSFGT 42
>XP_005247840
          Length = 645

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  RIVSGSFGT 9
          ++ SGSFGT
Sbjct: 34 KLGSGSFGT 42
>NP_001885
          Length = 416

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>NP_689407
          Length = 416

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>NP_004657
          Length = 513

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VSGSFGT 9
           +SG+FGT
Sbjct: 427 LSGTFGT 433
>NP_001186329
          Length = 1214

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>NP_660204
          Length = 337

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 22 KIGSGSFG 29
>NP_001186327
          Length = 1242

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>NP_001186326
          Length = 1286

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>NP_001186328
          Length = 1189

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>NP_001276841
          Length = 416

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>NP_001020276
          Length = 365

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 22 KIGSGSFG 29
>NP_036356
          Length = 1258

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>NP_056053
          Length = 1113

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>NP_849143
          Length = 415

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           RI++GSF
Sbjct: 233 RIITGSF 239
>NP_001229279
          Length = 299

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VSGSFGT 9
           +SG+FGT
Sbjct: 210 LSGTFGT 216
>NP_511043
          Length = 467

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VSGSFGT 9
           +SG+FGT
Sbjct: 378 LSGTFGT 384
>NP_004656
          Length = 520

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VSGSFGT 9
           +SG+FGT
Sbjct: 431 LSGTFGT 437
>NP_001258670
          Length = 325

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 22 KIGSGSFG 29
>NP_001883
          Length = 337

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 22 KIGSGSFG 29
>NP_001884
          Length = 415

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>NP_620693
          Length = 409

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>NP_001155134
          Length = 1118

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>NP_001155133
          Length = 1119

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>XP_005256394
          Length = 427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>XP_005256393
          Length = 450

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          +I SGSFG
Sbjct: 14 KIGSGSFG 21
>XP_006715656
          Length = 467

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VSGSFGT 9
           +SG+FGT
Sbjct: 378 LSGTFGT 384
>XP_006714899
          Length = 881

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  VSGSFG 8
          +SGSFG
Sbjct: 43 ISGSFG 48
>XP_005265910
          Length = 1112

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>XP_006714898
          Length = 1117

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>XP_005265909
          Length = 1118

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>XP_005265908
          Length = 1123

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>XP_005265907
          Length = 1124

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   VSGSFG 8
           +SGSFG
Sbjct: 286 ISGSFG 291
>XP_006714291
          Length = 1227

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>XP_006714290
          Length = 1269

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           +I+SGSF
Sbjct: 214 KIISGSF 220
>NP_005430
          Length = 248

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  RIVSGSFG 8
          R++SG FG
Sbjct: 29 RMLSGGFG 36
>NP_976035
          Length = 346

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1  RIVSGSFG 8
          R+V G FG
Sbjct: 13 RVVLGEFG 20
>NP_110380
          Length = 355

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           +GSFGT
Sbjct: 290 TGSFGT 295
>NP_002309
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   RIVSGSFG 8
           R+V G FG
Sbjct: 228 RVVCGMFG 235
>NP_005219
          Length = 1210

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 720 SGAFGT 725
>NP_001167639
          Length = 612

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 356 SGNFGT 361
>NP_001036064
          Length = 1292

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 726 SGAFGT 731
>NP_060058
          Length = 334

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   IVSGSF 7
           IVSGSF
Sbjct: 144 IVSGSF 149
>NP_001167638
          Length = 635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 379 SGNFGT 384
>NP_001128524
          Length = 612

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 356 SGNFGT 361
>NP_003168
          Length = 635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 379 SGNFGT 384
>NP_438172
          Length = 334

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   IVSGSF 7
           IVSGSF
Sbjct: 144 IVSGSF 149
>NP_005226
          Length = 1308

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 726 SGAFGT 731
>NP_149122
          Length = 352

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           +GSFGT
Sbjct: 287 TGSFGT 292
>NP_079321
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SGS+GT
Sbjct: 272 SGSYGT 277
>NP_848549
          Length = 266

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 182 SGNFGT 187
>NP_001243326
          Length = 539

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RIVSGSFGT 9
           RIV   FGT
Sbjct: 105 RIVISEFGT 113
>NP_001276866
          Length = 1055

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 728 SGAFGT 733
>NP_004439
          Length = 1255

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 728 SGAFGT 733
>NP_001276865
          Length = 1240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 713 SGAFGT 718
>NP_001005862
          Length = 1225

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 698 SGAFGT 703
>NP_059125
          Length = 547

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  RIVSGSFGT 9
          RIV   FGT
Sbjct: 87 RIVVSEFGT 95
>NP_001032367
          Length = 545

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RIVSGSFGT 9
           RIV   FGT
Sbjct: 105 RIVISEFGT 113
>NP_001243329
          Length = 474

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1  RIVSGSFGT 9
          RIV   FGT
Sbjct: 34 RIVISEFGT 42
>NP_001243327
          Length = 506

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RIVSGSFGT 9
           RIV   FGT
Sbjct: 139 RIVISEFGT 147
>NP_114144
          Length = 579

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   RIVSGSFGT 9
           RIV   FGT
Sbjct: 139 RIVISEFGT 147
>NP_061760
          Length = 796

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           +GSFGT
Sbjct: 271 TGSFGT 276
>XP_005261808
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SGS+GT
Sbjct: 272 SGSYGT 277
>XP_005259076
          Length = 478

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           R++SGS+
Sbjct: 246 RVISGSY 252
>XP_005257197
          Length = 1225

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 698 SGAFGT 703
>XP_006721828
          Length = 1336

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 809 SGAFGT 814
>XP_006717367
          Length = 564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           +GSFGT
Sbjct: 347 AGSFGT 352
>XP_005252204
          Length = 635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 379 SGNFGT 384
>XP_005272220
          Length = 334

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   IVSGSF 7
           IVSGSF
Sbjct: 144 IVSGSF 149
>XP_005249548
          Length = 342

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1  RIVSGSFG 8
          R+V G FG
Sbjct: 13 RVVLGEFG 20
>XP_005246434
          Length = 1282

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 716 SGAFGT 721
>XP_005246433
          Length = 1298

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 716 SGAFGT 721
>XP_005246432
          Length = 1307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 741 SGAFGT 746
>XP_006712427
          Length = 1323

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 741 SGAFGT 746
>XP_006710425
          Length = 176

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  SGSFGT 9
          SG+FGT
Sbjct: 92 SGNFGT 97
>XP_006710424
          Length = 176

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4  SGSFGT 9
          SG+FGT
Sbjct: 92 SGNFGT 97
>XP_005270526
          Length = 266

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 182 SGNFGT 187
>XP_005270527
          Length = 266

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   SGSFGT 9
           SG+FGT
Sbjct: 182 SGNFGT 187
>NP_060178
          Length = 478

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   RIVSGSF 7
           R++SGS+
Sbjct: 246 RVISGSY 252
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.322    0.140    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 550,503
Number of extensions: 1132
Number of successful extensions: 95
Number of sequences better than 10000.0: 95
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 95
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package