Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443161 17 3301 XP_006710380 17 3301 XP_005245788 17 3301 XP_006710379 17 3301 XP_006710378 17 3301 NP_001264282 17 4312 NP_115766 16 5631 NP_000042 16 7355 NP_065935 16 7355 NP_055654 16 7355 NP_115558 16 7355 NP_003794 16 7355 NP_062830 16 7355 XP_006723903 16 7355 XP_006723902 16 7355 XP_006718908 16 7355 XP_005271621 16 7355 XP_006718907 16 7355 XP_006718906 16 7355 XP_005271619 16 7355 XP_005271618 16 7355 NP_002871 15 9605 NP_620059 15 9605 NP_001186329 15 9605 NP_001186327 15 9605 NP_001186326 15 9605 NP_001186328 15 9605 NP_001032519 15 9605 NP_036356 15 9605 NP_001182226 15 9605 NP_001182225 15 9605 NP_008905 15 9605 NP_005489 15 9605 NP_001265108 15 9605 NP_001265106 15 9605 NP_001265105 15 9605 NP_001265103 15 9605 NP_001265102 15 9605 NP_001265100 15 9605 NP_001265099 15 9605 NP_006707 15 9605 NP_001265104 15 9605 NP_001265107 15 9605 XP_005259758 15 9605 XP_005267409 15 9605 XP_006720108 15 9605 XP_006715906 15 9605 XP_005250178 15 9605 XP_005250177 15 9605 XP_006714291 15 9605 XP_006714290 15 9605 XP_006714213 15 9605 XP_006714212 15 9605 XP_005265715 15 9605 XP_005265714 15 9605 XP_006714211 15 9605 XP_005265713 15 9605 XP_005265417 15 9605 XP_005265416 15 9605 XP_005265415 15 9605 XP_005265414 15 9605 XP_005265412 15 9605 NP_008885 15 9605>NP_443161 Length = 1412 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 +ITQ KNQ+ Sbjct: 1293 KITQLKNQL 1301Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ+KN++ Sbjct: 730 ITQEKNRV 737>XP_006710380 Length = 1398 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 +ITQ KNQ+ Sbjct: 1279 KITQLKNQL 1287Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ+KN++ Sbjct: 752 ITQEKNRV 759>XP_005245788 Length = 1434 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 +ITQ KNQ+ Sbjct: 1315 KITQLKNQL 1323Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ+KN++ Sbjct: 752 ITQEKNRV 759>XP_006710379 Length = 1452 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 +ITQ KNQ+ Sbjct: 1315 KITQLKNQL 1323Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ+KN++ Sbjct: 752 ITQEKNRV 759>XP_006710378 Length = 1478 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 +ITQ KNQ+ Sbjct: 1314 KITQLKNQL 1322Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ+KN++ Sbjct: 752 ITQEKNRV 759>NP_001264282 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RITQQKNQI 9 RITQ NQ+ Sbjct: 27 RITQTNNQL 35>NP_115766 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RITQQKNQ 8 RITQ+K Q Sbjct: 32 RITQRKKQ 39>NP_000042 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>NP_065935 Length = 1983 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITQQKNQI 9 ITQ+KN + Sbjct: 929 ITQEKNDL 936>NP_055654 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RITQQKN 7 RITQ KN Sbjct: 297 RITQYKN 303>NP_115558 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RITQQKNQ 8 +ITQ+KN+ Sbjct: 247 QITQRKNE 254>NP_003794 Length = 1685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RITQQKNQI 9 R+T KNQ+ Sbjct: 307 RVTWYKNQV 315>NP_062830 Length = 1589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RITQQKNQI 9 R+T KNQ+ Sbjct: 307 RVTWYKNQV 315>XP_006723903 Length = 1989 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITQQKNQI 9 ITQ+KN + Sbjct: 929 ITQEKNDL 936>XP_006723902 Length = 1787 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITQQKNQI 9 ITQ+KN + Sbjct: 727 ITQEKNDL 734>XP_006718908 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 227 RITQQK 232>XP_005271621 Length = 2708 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1227 RITQQK 1232>XP_006718907 Length = 3050 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1569 RITQQK 1574>XP_006718906 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>XP_005271619 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>XP_005271618 Length = 3056 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RITQQK 6 RITQQK Sbjct: 1575 RITQQK 1580>NP_002871 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN+I Sbjct: 324 TQEKNKI 330>NP_620059 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITQQKNQ 8 ITQQ+N+ Sbjct: 379 ITQQQNE 385>NP_001186329 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 894 RITIQENEV 902>NP_001186327 Length = 1242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 922 RITIQENEV 930>NP_001186326 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 966 RITIQENEV 974>NP_001186328 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 869 RITIQENEV 877>NP_001032519 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 482 LTRQRNQL 489>NP_036356 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 938 RITIQENEV 946>NP_001182226 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITQQKNQ 8 ITQQ+N+ Sbjct: 379 ITQQQNE 385>NP_001182225 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITQQKNQ 8 ITQQ+N+ Sbjct: 379 ITQQQNE 385>NP_008905 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 186 TQEKNEV 192>NP_005489 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITQQKNQI 9 ITQQ N++ Sbjct: 135 ITQQSNKL 142>NP_001265108 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 75 TQEKNEV 81>NP_001265106 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 208 TQEKNEV 214>NP_001265105 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 144 TQEKNEV 150>NP_001265103 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 75 TQEKNEV 81>NP_001265102 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 205 TQEKNEV 211>NP_001265100 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 75 TQEKNEV 81>NP_001265099 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 193 TQEKNEV 199>NP_006707 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ++N+I Sbjct: 603 ITQEENRI 610>NP_001265104 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 109 TQEKNEV 115>NP_001265107 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 75 TQEKNEV 81>XP_005259758 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ITQQKNQI 9 ITQQ N++ Sbjct: 135 ITQQSNKL 142>XP_005267409 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITQQKNQ 8 ITQQ+N+ Sbjct: 343 ITQQQNE 349>XP_006720108 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ITQQKNQ 8 ITQQ+N+ Sbjct: 379 ITQQQNE 385>XP_006715906 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ++N+I Sbjct: 379 ITQEENRI 386>XP_005250178 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ++N+I Sbjct: 379 ITQEENRI 386>XP_005250177 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 ITQ++N+I Sbjct: 602 ITQEENRI 609>XP_006714291 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 907 RITIQENEV 915>XP_006714290 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RITQQKNQI 9 RIT Q+N++ Sbjct: 949 RITIQENEV 957>XP_006714213 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 500 LTRQRNQL 507>XP_006714212 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 500 LTRQRNQL 507>XP_005265715 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 418 LTRQRNQL 425>XP_005265714 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 429 LTRQRNQL 436>XP_006714211 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 500 LTRQRNQL 507>XP_005265713 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 ITQQKNQI 9 +T+Q+NQ+ Sbjct: 500 LTRQRNQL 507>XP_005265417 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN+I Sbjct: 324 TQEKNKI 330>XP_005265416 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN+I Sbjct: 210 TQEKNKI 216>XP_005265415 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN+I Sbjct: 243 TQEKNKI 249>XP_005265414 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN+I Sbjct: 291 TQEKNKI 297>XP_005265412 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN+I Sbjct: 324 TQEKNKI 330>NP_008885 Length = 811 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TQQKNQI 9 TQ+KN++ Sbjct: 187 TQEKNEV 193Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.125 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 463,254 Number of extensions: 598 Number of successful extensions: 68 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |