Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689966 18 1482 XP_005249005 18 1482 XP_005249004 18 1482 XP_005249003 18 1482 XP_005249000 18 1482 NP_705834 17 4312 NP_001269939 16 7355 NP_001269938 16 7355 NP_116575 16 7355 NP_057518 16 7355 NP_570969 16 7355 NP_055918 16 7355 NP_055455 16 7355 NP_714544 16 7355 XP_006723946 16 7355 XP_006720470 16 7355 XP_005247035 16 7355 XP_006712939 16 7355 XP_006712938 16 7355 XP_006712937 16 7355 XP_006712936 16 7355 XP_005247034 16 7355 XP_006710049 16 7355 XP_005276017 16 7355 NP_001175 15 9605 NP_001191150 15 9605 NP_443128 15 9605 NP_005910 15 9605 XP_005276647 15 9605 XP_005276648 15 9605 XP_006726767 15 9605>NP_689966 Length = 993 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RISSFLRP 8 ++SSFLRP Sbjct: 984 KVSSFLRP 991>XP_005249005 Length = 531 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RISSFLRP 8 ++SSFLRP Sbjct: 522 KVSSFLRP 529>XP_005249004 Length = 955 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RISSFLRP 8 ++SSFLRP Sbjct: 946 KVSSFLRP 953>XP_005249003 Length = 987 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RISSFLRP 8 ++SSFLRP Sbjct: 978 KVSSFLRP 985>XP_005249000 Length = 1009 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RISSFLRP 8 ++SSFLRP Sbjct: 1000 KVSSFLRP 1007>NP_705834 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 R+SSFLR Sbjct: 525 RVSSFLR 531>NP_001269939 Length = 996 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 +ISSFLR Sbjct: 957 KISSFLR 963>NP_001269938 Length = 1300 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 +ISSFLR Sbjct: 1180 KISSFLR 1186>NP_116575 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 +ISSFLR Sbjct: 1204 KISSFLR 1210>NP_057518 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 +ISSFLR Sbjct: 1180 KISSFLR 1186>NP_570969 Length = 605 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 +ISSFLR Sbjct: 533 KISSFLR 539>NP_055918 Length = 1925 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ISSFLRPS 9 +S+FL PS Sbjct: 280 VSAFLHPS 287>NP_055455 Length = 1199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>NP_714544 Length = 1775 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISSFLRPS 9 +SSFLR S Sbjct: 1572 VSSFLRQS 1579>XP_006723946 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 ++SFLRP Sbjct: 1386 LASFLRP 1392>XP_006720470 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISSFLRPS 9 +SSFLR S Sbjct: 814 VSSFLRQS 821>XP_005247035 Length = 971 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>XP_006712939 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>XP_006712938 Length = 1138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>XP_006712937 Length = 1199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>XP_006712936 Length = 1199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>XP_005247034 Length = 1199 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SSFLRPS 9 SSFL PS Sbjct: 361 SSFLNPS 367>XP_006710049 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ISSFLRPS 9 +SSFLR S Sbjct: 90 VSSFLRQS 97>XP_005276017 Length = 610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 ++SFLRP Sbjct: 571 LASFLRP 577>NP_001175 Length = 2644 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RISSFLRPS 9 R+SS L PS Sbjct: 433 RLSSSLNPS 441>NP_001191150 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 ISSFLRP 8 I SFLRP Sbjct: 145 ILSFLRP 151>NP_443128 Length = 3487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RISSFLR 7 +ISSFLR Sbjct: 2081 QISSFLR 2087>NP_005910 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SSFLRPS 9 ++FLRPS Sbjct: 294 ATFLRPS 300>XP_005276647 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 119 VSSWLRP 125Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 252 VSSWLRP 258Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 404 VSSWLRP 410>XP_005276648 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 119 VSSWLRP 125Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 252 VSSWLRP 258Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 404 VSSWLRP 410>XP_006726767 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 119 VSSWLRP 125Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 252 VSSWLRP 258Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ISSFLRP 8 +SS+LRP Sbjct: 404 VSSWLRP 410Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.137 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,770 Number of extensions: 1055 Number of successful extensions: 37 Number of sequences better than 10000.0: 31 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |