Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 NP_078813 17 3301 XP_006720016 17 3301 NP_000050 17 4312 NP_055319 17 4312 NP_001273990 17 4312 NP_001273991 17 4312 NP_001273989 17 4312 NP_071933 16 5631 NP_001265641 16 5631 XP_006726514 16 5631 XP_003846779 16 5631 NP_056289 16 7355 NP_878918 16 7355 NP_055995 16 7355 NP_001172087 16 7355 NP_112497 16 7355 NP_001229468 16 7355 NP_054790 16 7355 NP_689484 16 7355 NP_001159438 16 7355 XP_006723818 16 7355 XP_006723817 16 7355 XP_006723816 16 7355 XP_006723815 16 7355 XP_006723814 16 7355 XP_006723813 16 7355 XP_005260405 16 7355 XP_006721645 16 7355 XP_006720147 16 7355 XP_005267517 16 7355 XP_005267516 16 7355 XP_005267515 16 7355 XP_005267514 16 7355 XP_005267513 16 7355 XP_005267512 16 7355 XP_005267511 16 7355 XP_005273742 16 7355 NP_001127854 15 9605 NP_055684 15 9605 NP_037452 15 9605 NP_060350 15 9605 NP_000695 15 9605 NP_065764 15 9605 XP_005260283 15 9605 XP_005264448 15 9605 XP_005264447 15 9605 XP_005264446 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 2580 RSRITKNVP 2588>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 1232 RSRITKNVP 1240>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 2232 RSRITKNVP 2240>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 2574 RSRITKNVP 2582>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 2580 RSRITKNVP 2588>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 2580 RSRITKNVP 2588>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIRITKNVP 9 R RITKNVP Sbjct: 2580 RSRITKNVP 2588>NP_078813 Length = 564 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IRITKNVP 9 +R+T+N+P Sbjct: 163 LRVTENIP 170>XP_006720016 Length = 451 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IRITKNVP 9 +R+T+N+P Sbjct: 50 LRVTENIP 57>NP_000050 Length = 3418 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 + +TKN+P Sbjct: 807 VELTKNIP 814>NP_055319 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 I+ITKN P Sbjct: 302 IKITKNEP 309>NP_001273990 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 I+ITKN P Sbjct: 316 IKITKNEP 323>NP_001273991 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 I+ITKN P Sbjct: 302 IKITKNEP 309>NP_001273989 Length = 299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 I+ITKN P Sbjct: 110 IKITKNEP 117>NP_071933 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ITKNVP 9 +TKNVP Sbjct: 75 VTKNVP 80>NP_001265641 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ITKNVP 9 +TKNVP Sbjct: 75 VTKNVP 80>XP_006726514 Length = 1038 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +RIT+N P Sbjct: 515 LRITENTP 522>XP_003846779 Length = 914 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +RIT+N P Sbjct: 449 LRITENTP 456>NP_056289 Length = 626 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IRITKN 7 IRITKN Sbjct: 530 IRITKN 535>NP_878918 Length = 6907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>NP_055995 Length = 6885 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>NP_001172087 Length = 63 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 ++RIT VP Sbjct: 16 KLRITSRVP 24>NP_112497 Length = 974 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RITKNVP 9 RIT NVP Sbjct: 696 RITYNVP 702>NP_001229468 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>NP_054790 Length = 2063 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>NP_689484 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ITKNVP 9 +TKNVP Sbjct: 564 LTKNVP 569>NP_001159438 Length = 938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RITKNVP 9 RIT NVP Sbjct: 660 RITYNVP 666>XP_006723818 Length = 1975 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_006723817 Length = 2020 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_006723816 Length = 2034 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_006723815 Length = 2051 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_006723814 Length = 2052 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_006723813 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_005260405 Length = 2063 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 +R+T N+P Sbjct: 94 VRVTFNIP 101>XP_006721645 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RITKNVP 9 RIT NVP Sbjct: 655 RITYNVP 661>XP_006720147 Length = 4788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267517 Length = 6883 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267516 Length = 6884 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267515 Length = 6899 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267514 Length = 6908 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267513 Length = 6921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267512 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005267511 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIRITKNVP 9 RIR +NVP Sbjct: 3534 RIRSIQNVP 3542>XP_005273742 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ITKNVP 9 +TKNVP Sbjct: 553 LTKNVP 558>NP_001127854 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 IR+T +VP Sbjct: 811 IRLTSSVP 818>NP_055684 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 IR+T +VP Sbjct: 825 IRLTSSVP 832>NP_037452 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IRITKNV 8 +RI+KNV Sbjct: 684 VRISKNV 690>NP_060350 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RITKNV 8 RITKN+ Sbjct: 183 RITKNI 188>NP_000695 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 ITKNVP 9 +TKN+P Sbjct: 791 LTKNIP 796>NP_065764 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 I +TK+VP Sbjct: 258 ITVTKSVP 265>XP_005260283 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IRITKNVP 9 I +TK+VP Sbjct: 272 ITVTKSVP 279>XP_005264448 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RITKNV 8 RITKN+ Sbjct: 183 RITKNI 188>XP_005264447 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RITKNV 8 RITKN+ Sbjct: 183 RITKNI 188>XP_005264446 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RITKNV 8 RITKN+ Sbjct: 183 RITKNI 188Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.143 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 478,448 Number of extensions: 883 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |