Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_001185763 19 869 NP_055459 19 869 XP_006726436 19 869 XP_006711784 19 869 XP_006711719 19 869 XP_006711718 19 869 XP_006711717 19 869 XP_006711716 19 869 XP_006711715 19 869 XP_006711714 19 869 XP_006711713 19 869 XP_006711712 19 869 XP_006711711 19 869 XP_006711710 19 869 XP_006711709 19 869 XP_005277503 19 869 XP_005273038 19 869 XP_006711708 19 869 XP_005277500 19 869 XP_006711707 19 869 XP_005277499 19 869 XP_006711706 19 869 XP_006711705 19 869 XP_006710122 19 869 XP_006726410 17 2528 XP_006711164 17 2528 XP_005276114 17 2528 NP_001095271 17 4312 NP_001095270 17 4312 XP_005272064 17 4312 NP_001609 16 5631 NP_006098 16 5631 NP_057508 16 5631 XP_005257512 16 5631 XP_006722006 16 5631 XP_005257511 16 5631 XP_005257509 16 5631 XP_005257508 16 5631 XP_005257507 16 5631 XP_005257506 16 5631 XP_005257505 16 5631 XP_005265253 16 5631 NP_886552 16 5631 NP_055461 16 7355 NP_001159907 16 7355 NP_001159908 16 7355 NP_001159906 16 7355 NP_002206 16 7355 NP_443109 16 7355 NP_001001653 16 7355 NP_963836 16 7355 XP_005258236 16 7355 XP_006722431 16 7355 XP_005258235 16 7355 XP_005258234 16 7355 NP_001490 15 9605 NP_001003722 15 9605 NP_851607 15 9605 NP_065878 15 9605 NP_065156 15 9605 XP_005259257 15 9605 XP_006717123 15 9605 XP_005251982 15 9605 XP_006717122 15 9605 XP_006717121 15 9605 XP_005263212 15 9605 XP_005263211 15 9605 XP_006711529 15 9605 XP_006711528 15 9605 NP_003361 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2177 RTKVSKQER 2185>NP_001185763 Length = 2362 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2283 RTKVSKQER 2291>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2283 RTKVSKQER 2291>XP_006726436 Length = 178 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 61 RTKVSKQER 69>XP_006711784 Length = 178 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 61 RTKVSKQER 69>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2239 RTKVSKQER 2247>XP_006711718 Length = 1436 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 1290 RTKVSKQER 1298>XP_006711717 Length = 2385 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2239 RTKVSKQER 2247>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2348 RTKVSKQER 2356>XP_006711715 Length = 2428 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2282 RTKVSKQER 2290>XP_006711714 Length = 2429 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2283 RTKVSKQER 2291>XP_006711713 Length = 2432 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2286 RTKVSKQER 2294>XP_006711712 Length = 2473 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2327 RTKVSKQER 2335>XP_006711711 Length = 2482 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2336 RTKVSKQER 2344>XP_006711710 Length = 2494 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2348 RTKVSKQER 2356>XP_006711709 Length = 2495 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2349 RTKVSKQER 2357>XP_005277503 Length = 2498 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2446 RTKVSKQER 2454>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2446 RTKVSKQER 2454>XP_006711708 Length = 2512 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2366 RTKVSKQER 2374>XP_005277500 Length = 2525 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2446 RTKVSKQER 2454>XP_006711707 Length = 2553 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2407 RTKVSKQER 2415>XP_005277499 Length = 2561 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2446 RTKVSKQER 2454>XP_006711706 Length = 2591 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2445 RTKVSKQER 2453>XP_006711705 Length = 2592 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 2446 RTKVSKQER 2454>XP_006710122 Length = 126 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQER Sbjct: 61 RTKVSKQER 69>XP_006726410 Length = 2087 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQE+ Sbjct: 2024 RTKVSKQEQ 2032>XP_006711164 Length = 2087 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQE+ Sbjct: 2024 RTKVSKQEQ 2032>XP_005276114 Length = 134 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R KVSKQE+ Sbjct: 31 RTKVSKQEQ 39>NP_001095271 Length = 791 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKVSKQER 9 IKV+K+ER Sbjct: 601 IKVTKEER 608>NP_001095270 Length = 887 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKVSKQER 9 IKV+K+ER Sbjct: 697 IKVTKEER 704>XP_005272064 Length = 909 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IKVSKQER 9 IKV+K+ER Sbjct: 719 IKVTKEER 726>NP_001609 Length = 1014 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 ++KV KQ+R Sbjct: 347 KLKVKKQDR 355>NP_006098 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>NP_057508 Length = 432 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005257512 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_006722006 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 170 RLKKEKQER 178>XP_005257511 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005257509 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005257508 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005257507 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005257506 Length = 472 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005257505 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIKVSKQER 9 R+K KQER Sbjct: 246 RLKKEKQER 254>XP_005265253 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RIKVSKQER 9 R+K++K+E+ Sbjct: 312 RLKIAKEEK 320>NP_886552 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RIKVSKQER 9 R+K++K+E+ Sbjct: 312 RLKIAKEEK 320>NP_055461 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 KVSK+ER Sbjct: 274 KVSKRER 280>NP_001159907 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+KV ++ER Sbjct: 290 RMKVDREER 298>NP_001159908 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+KV ++ER Sbjct: 290 RMKVDREER 298>NP_001159906 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+KV ++ER Sbjct: 436 RMKVDREER 444>NP_002206 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+KV ++ER Sbjct: 578 RMKVDREER 586>NP_443109 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 K+SK+ER Sbjct: 153 KISKEER 159>NP_001001653 Length = 179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 K+SK+ER Sbjct: 64 KISKEER 70>NP_963836 Length = 268 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 K+SK+ER Sbjct: 153 KISKEER 159>XP_005258236 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 KVSK+ER Sbjct: 274 KVSKRER 280>XP_006722431 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 KVSK+ER Sbjct: 274 KVSKRER 280>XP_005258235 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 KVSK+ER Sbjct: 274 KVSKRER 280>XP_005258234 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KVSKQER 9 KVSK+ER Sbjct: 311 KVSKRER 317>NP_001490 Length = 659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+K ++QER Sbjct: 227 RVKQAEQER 235>NP_001003722 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+K ++QER Sbjct: 227 RVKQAEQER 235>NP_851607 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KVSKQER 9 KVS QER Sbjct: 639 KVSSQER 645>NP_065878 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RIKVSKQE 8 ++K+ KQE Sbjct: 278 KVKIKKQE 285>NP_065156 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KVSKQER 9 KVS QER Sbjct: 585 KVSSQER 591>XP_005259257 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KVSKQE 8 KVSKQE Sbjct: 237 KVSKQE 242>XP_006717123 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+K ++QER Sbjct: 230 RVKQAEQER 238>XP_005251982 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+K ++QER Sbjct: 227 RVKQAEQER 235>XP_006717122 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+K ++QER Sbjct: 230 RVKQAEQER 238>XP_006717121 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RIKVSKQER 9 R+K ++QER Sbjct: 230 RVKQAEQER 238>XP_005263212 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RIKVSKQE 8 ++K+ KQE Sbjct: 278 KVKIKKQE 285>XP_005263211 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RIKVSKQE 8 ++K+ KQE Sbjct: 278 KVKIKKQE 285>XP_006711529 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KVSKQER 9 KVS QER Sbjct: 443 KVSSQER 449>XP_006711528 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KVSKQER 9 KVS QER Sbjct: 639 KVSSQER 645>NP_003361 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KVSKQE 8 KVSKQE Sbjct: 237 KVSKQE 242Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.125 0.291 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 421,705 Number of extensions: 815 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |