Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 869 NP_001035957 19 869 XP_006721991 19 869 XP_006721990 19 869 XP_006721989 19 869 XP_005258041 19 869 XP_006721988 19 869 XP_006721987 19 869 XP_006721986 19 869 XP_005258040 19 869 XP_006721985 19 869 NP_002903 17 4312 NP_001273361 17 4312 NP_001273360 17 4312 XP_006715607 17 4312 XP_006715606 17 4312 NP_742093 16 7355 NP_001269238 16 7355 NP_001269239 16 7355 NP_473361 16 7355 NP_004411 16 7355 NP_006849 15 9605 NP_001099129 15 9605 NP_060547 15 9605 NP_065962 15 9605 NP_775808 15 9605 XP_006722694 15 9605 XP_005250743 15 9605 XP_006716234 15 9605 XP_005277669 15 9605 XP_005277638 15 9605 XP_005277637 15 9605 XP_005277636 15 9605 XP_006710416 15 9605 XP_006710415 15 9605 XP_005270511 15 9605 XP_005270508 15 9605 NP_001159607 15 9605 NP_001003795 15 9605>NP_000258 Length = 2818 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1413 RIERGLKLM 1421>NP_001035957 Length = 2839 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1434 RIERGLKLM 1442>XP_006721991 Length = 1632 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1444 RIERGLKLM 1452>XP_006721990 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1444 RIERGLKLM 1452>XP_006721989 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1444 RIERGLKLM 1452>XP_005258041 Length = 2836 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1413 RIERGLKLM 1421>XP_006721988 Length = 2846 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1423 RIERGLKLM 1431>XP_006721987 Length = 2849 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1444 RIERGLKLM 1452>XP_006721986 Length = 2854 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1431 RIERGLKLM 1439>XP_005258040 Length = 2857 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1434 RIERGLKLM 1442>XP_006721985 Length = 2867 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RIER LKLM Sbjct: 1444 RIERGLKLM 1452>NP_002903 Length = 3130 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IERSLKLM 9 +ERSLKL+ Sbjct: 2870 LERSLKLL 2877>NP_001273361 Length = 3052 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IERSLKLM 9 +ERSLKL+ Sbjct: 2792 LERSLKLL 2799>NP_001273360 Length = 3052 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IERSLKLM 9 +ERSLKL+ Sbjct: 2792 LERSLKLL 2799>XP_006715607 Length = 3052 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IERSLKLM 9 +ERSLKL+ Sbjct: 2792 LERSLKLL 2799>XP_006715606 Length = 3130 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IERSLKLM 9 +ERSLKL+ Sbjct: 2870 LERSLKLL 2877>NP_742093 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 R+ RSLKL+ Sbjct: 213 RVLRSLKLL 221>NP_001269238 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 R+ RSLKL+ Sbjct: 213 RVLRSLKLL 221>NP_001269239 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 R+ RSLKL+ Sbjct: 219 RVLRSLKLL 227>NP_473361 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 R+ RSLKL+ Sbjct: 213 RVLRSLKLL 221>NP_004411 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ERSLKLM 9 ERSLKL+ Sbjct: 297 ERSLKLL 303>NP_006849 Length = 227 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RIERSLKLM 9 R+ERS++++ Sbjct: 164 RLERSIQML 172>NP_001099129 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+ERS+K Sbjct: 399 RLERSMK 405>NP_060547 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RI+RSL+ M Sbjct: 591 RIQRSLQKM 599>NP_065962 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIERSLKL 8 R+E+ LKL Sbjct: 1347 RVEKGLKL 1354>NP_775808 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+E+SLK Sbjct: 598 RVEKSLK 604>XP_006722694 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RIERSLKLM 9 R+ERS++++ Sbjct: 126 RLERSIQML 134>XP_005250743 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIERSLKL 8 R+E+ LKL Sbjct: 1347 RVEKGLKL 1354>XP_006716234 Length = 1894 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RIERSLKL 8 R+E+ LKL Sbjct: 1347 RVEKGLKL 1354>XP_005277669 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+E+SLK Sbjct: 598 RVEKSLK 604>XP_005277638 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+E+SLK Sbjct: 404 RVEKSLK 410>XP_005277637 Length = 878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+E+SLK Sbjct: 527 RVEKSLK 533>XP_005277636 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+E+SLK Sbjct: 598 RVEKSLK 604>XP_006710416 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+ERS+K Sbjct: 79 RLERSMK 85>XP_006710415 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+ERS+K Sbjct: 79 RLERSMK 85>XP_005270511 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+ERS+K Sbjct: 79 RLERSMK 85>XP_005270508 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+ERS+K Sbjct: 399 RLERSMK 405>NP_001159607 Length = 618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIERSLKLM 9 RI+RSL+ M Sbjct: 450 RIQRSLQKM 458>NP_001003795 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIERSLK 7 R+E+SLK Sbjct: 598 RVEKSLK 604Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.143 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 355,985 Number of extensions: 553 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |