Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 18 1935 XP_005248577 18 1935 XP_005248576 18 1935 NP_000248 17 2528 XP_005267754 17 2528 XP_005267753 17 2528 NP_060064 17 3301 NP_001123520 16 5631 NP_056111 16 5631 NP_001274675 16 5631 NP_001035865 16 5631 NP_061909 16 5631 NP_001274670 16 5631 XP_005254093 16 5631 XP_006720003 16 5631 XP_006720002 16 5631 XP_006720000 16 5631 XP_006719999 16 5631 XP_006719998 16 5631 XP_006719997 16 5631 XP_006719995 16 5631 XP_006719994 16 5631 XP_006719993 16 5631 XP_006719991 16 5631 XP_006719990 16 5631 XP_006719988 16 5631 XP_006719987 16 5631 XP_006719985 16 5631 NP_000704 16 7355 NP_003326 16 7355 XP_005265487 16 7355 XP_006713384 16 7355 NP_060816 16 7355 NP_570629 15 9605 NP_001034439 15 9605 NP_001927 15 9605 NP_001277181 15 9605 XP_005252741 15 9605 XP_006715935 15 9605 XP_006715934 15 9605 NP_005584 15 9605 NP_001012526 15 9605>NP_005912 Length = 1512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIAVFGAAA 9 RIA FGAAA Sbjct: 1385 RIADFGAAA 1393>XP_005248577 Length = 1349 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIAVFGAAA 9 RIA FGAAA Sbjct: 1222 RIADFGAAA 1230>XP_005248576 Length = 1375 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RIAVFGAAA 9 RIA FGAAA Sbjct: 1248 RIADFGAAA 1256>NP_000248 Length = 1935 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 +AVFGAAA Sbjct: 6 MAVFGAAA 13>XP_005267754 Length = 1087 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 +AVFGAAA Sbjct: 6 MAVFGAAA 13>XP_005267753 Length = 1935 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 +AVFGAAA Sbjct: 6 MAVFGAAA 13>NP_060064 Length = 199 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RIAVFGA 7 R+AVFGA Sbjct: 9 RVAVFGA 15>NP_001123520 Length = 2068 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1783 RVAFFGQAA 1791>NP_056111 Length = 2069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1784 RVAFFGQAA 1792>NP_001274675 Length = 241 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 I+VFGAA+ Sbjct: 40 ISVFGAAS 47>NP_001035865 Length = 340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 I+VFGAA+ Sbjct: 139 ISVFGAAS 146>NP_061909 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 I+VFGAA+ Sbjct: 169 ISVFGAAS 176>NP_001274670 Length = 308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IAVFGAAA 9 I+VFGAA+ Sbjct: 107 ISVFGAAS 114>XP_005254093 Length = 2046 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1761 RVAFFGQAA 1769>XP_006720003 Length = 2058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1735 RVAFFGQAA 1743>XP_006720002 Length = 2058 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1735 RVAFFGQAA 1743>XP_006720000 Length = 2084 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1761 RVAFFGQAA 1769>XP_006719999 Length = 2095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1772 RVAFFGQAA 1780>XP_006719998 Length = 2103 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1818 RVAFFGQAA 1826>XP_006719997 Length = 2104 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1818 RVAFFGQAA 1826>XP_006719995 Length = 2106 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1783 RVAFFGQAA 1791>XP_006719994 Length = 2107 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1784 RVAFFGQAA 1792>XP_006719993 Length = 2110 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1787 RVAFFGQAA 1795>XP_006719991 Length = 2118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1795 RVAFFGQAA 1803>XP_006719990 Length = 2118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1795 RVAFFGQAA 1803>XP_006719988 Length = 2129 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1806 RVAFFGQAA 1814>XP_006719987 Length = 2130 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1807 RVAFFGQAA 1815>XP_006719985 Length = 2141 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A FG AA Sbjct: 1818 RVAFFGQAA 1826>NP_000704 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RIAVFGA 7 +IA+FGA Sbjct: 5 KIAIFGA 11>NP_003326 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RIAVFGA 7 +IAVFGA Sbjct: 418 QIAVFGA 424>XP_005265487 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RIAVFGA 7 +IAVFGA Sbjct: 418 QIAVFGA 424>XP_006713384 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RIAVFGA 7 +IAVFGA Sbjct: 418 QIAVFGA 424>NP_060816 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RIAVFGAA 8 R+A FGAA Sbjct: 141 RLAEFGAA 148>NP_570629 Length = 865 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RIAVFG 6 R+AVFG Sbjct: 705 RVAVFG 710>NP_001034439 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RIAVFG 6 R+AVFG Sbjct: 641 RVAVFG 646>NP_001927 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RIAVFG 6 R+AVFG Sbjct: 643 RVAVFG 648>NP_001277181 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RIAVFG 6 R+AVFG Sbjct: 598 RVAVFG 603>XP_005252741 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A GAAA Sbjct: 65 RVAAAGAAA 73>XP_006715935 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RIAVFG 6 R+AVFG Sbjct: 644 RVAVFG 649>XP_006715934 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RIAVFG 6 R+AVFG Sbjct: 644 RVAVFG 649>NP_005584 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RIAVFGA 7 R+A FGA Sbjct: 35 RVAAFGA 41>NP_001012526 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAVFGAAA 9 R+A GAAA Sbjct: 65 RVAAAGAAA 73Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.140 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 329,367 Number of extensions: 405 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |