Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 390 NP_996778 17 2528 NP_001180240 17 2528 XP_006715838 17 2528 XP_005246606 17 2528 XP_005246605 17 2528 NP_001180241 17 2528 NP_079004 17 2528 NP_001180242 17 2528 NP_056247 17 3301 NP_001123203 17 3301 NP_001123199 17 3301 NP_001123200 17 3301 NP_001123201 17 3301 NP_071928 17 4312 NP_001003845 17 4312 XP_006714549 17 4312 XP_006714548 17 4312 XP_005248392 17 4312 XP_005248393 17 4312 XP_005248391 17 4312 XP_005248390 17 4312 XP_005246599 17 4312 NP_002262 16 5631 NP_277045 16 5631 XP_005254110 16 5631 XP_005254109 16 5631 XP_005254106 16 5631 NP_001188467 16 7355 NP_001138820 16 7355 NP_004033 16 7355 NP_079049 16 7355 NP_001188468 16 7355 XP_006721155 16 7355 NP_073741 15 9605 NP_001120926 15 9605 NP_001120925 15 9605 NP_006179 15 9605 NP_004394 15 9605 NP_001091091 15 9605>NP_004251 Length = 1208 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RIAALLQTC 9 RIAALL+TC Sbjct: 715 RIAALLRTC 723>NP_996778 Length = 121 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAALLQTC 9 IAALL TC Sbjct: 98 IAALLATC 105>NP_001180240 Length = 471 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAALLQTC 9 R+AAL +TC Sbjct: 14 RVAALRRTC 22>XP_006715838 Length = 471 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAALLQTC 9 R+AAL +TC Sbjct: 14 RVAALRRTC 22>XP_005246606 Length = 121 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAALLQTC 9 IAALL TC Sbjct: 98 IAALLATC 105>XP_005246605 Length = 121 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IAALLQTC 9 IAALL TC Sbjct: 98 IAALLATC 105>NP_001180241 Length = 397 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAALLQTC 9 R+AAL +TC Sbjct: 14 RVAALRRTC 22>NP_079004 Length = 434 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAALLQTC 9 R+AAL +TC Sbjct: 14 RVAALRRTC 22>NP_001180242 Length = 445 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RIAALLQTC 9 R+AAL +TC Sbjct: 14 RVAALRRTC 22>NP_056247 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAALLQTC 9 R+ ALLQ C Sbjct: 336 RLEALLQNC 344>NP_001123203 Length = 1110 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAALLQTC 9 R+ ALLQ C Sbjct: 255 RLEALLQNC 263>NP_001123199 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAALLQTC 9 R+ ALLQ C Sbjct: 336 RLEALLQNC 344>NP_001123200 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAALLQTC 9 R+ ALLQ C Sbjct: 336 RLEALLQNC 344>NP_001123201 Length = 1191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAALLQTC 9 R+ ALLQ C Sbjct: 336 RLEALLQNC 344>NP_071928 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>NP_001003845 Length = 398 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RIAALLQT 8 +IAALLQT Sbjct: 253 QIAALLQT 260>XP_006714549 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>XP_006714548 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>XP_005248392 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>XP_005248393 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>XP_005248391 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>XP_005248390 Length = 215 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ALLQTC 9 ALLQTC Sbjct: 10 ALLQTC 15>XP_005246599 Length = 442 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 RIAALLQT 8 +IAALLQT Sbjct: 297 QIAALLQT 304>NP_002262 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IAALLQT 8 IAALLQT Sbjct: 461 IAALLQT 467>NP_277045 Length = 1401 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RIAALLQTC 9 R ALL+TC Sbjct: 363 RTLALLRTC 371>XP_005254110 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IAALLQT 8 IAALLQT Sbjct: 461 IAALLQT 467>XP_005254109 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IAALLQT 8 IAALLQT Sbjct: 461 IAALLQT 467>XP_005254106 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 IAALLQT 8 IAALLQT Sbjct: 461 IAALLQT 467>NP_001188467 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IAALLQTC 9 + ALL TC Sbjct: 13 VCALLNTC 20>NP_001138820 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RIAALLQT 8 ++AA+LQT Sbjct: 178 KVAAILQT 185>NP_004033 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IAALLQTC 9 + ALL TC Sbjct: 13 VCALLNTC 20>NP_079049 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RIAALLQT 8 ++AA+LQT Sbjct: 140 KVAAILQT 147>NP_001188468 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 IAALLQTC 9 + ALL TC Sbjct: 13 VCALLNTC 20>XP_006721155 Length = 427 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RIAALLQT 8 ++AA+LQT Sbjct: 151 KVAAILQT 158>NP_073741 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RIAALLQTC 9 R+A LQ C Sbjct: 596 RVAGRLQNC 604>NP_001120926 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AALLQTC 9 AALL TC Sbjct: 237 AALLGTC 243>NP_001120925 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AALLQTC 9 AALL TC Sbjct: 401 AALLGTC 407>NP_006179 Length = 109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IAALLQTC 9 IAA LQ C Sbjct: 12 IAAALQEC 19>NP_004394 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 AALLQTC 9 AALL TC Sbjct: 401 AALLGTC 407>NP_001091091 Length = 109 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 IAALLQTC 9 IAA LQ C Sbjct: 12 IAAALQEC 19Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.137 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 353,745 Number of extensions: 440 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |