Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 21 229 NP_005602 19 869 XP_005256140 19 869 NP_620775 18 1135 XP_005263337 18 1135 NP_899662 18 1935 NP_002886 18 1935 XP_006723905 18 1935 NP_006827 17 2528 NP_683710 17 4312 XP_006716207 17 4312 NP_001138836 17 4312 NP_683711 17 4312 NP_055498 16 5631 NP_002733 16 5631 NP_055062 16 5631 NP_001136082 16 5631 XP_006721669 16 5631 XP_005267916 16 5631 XP_006714485 16 5631 XP_005263418 16 5631 XP_005263417 16 5631 XP_006714484 16 5631 XP_005263416 16 5631 XP_006714483 16 5631 XP_005263415 16 5631 NP_005614 16 7355 NP_055270 15 9605 NP_056127 15 9605 NP_663696 15 9605 NP_653184 15 9605 NP_001034451 15 9605 NP_079380 15 9605 XP_006722169 15 9605 XP_006722168 15 9605 XP_006722167 15 9605 XP_006722166 15 9605 XP_006722164 15 9605 XP_006722163 15 9605 XP_006722162 15 9605 XP_006722161 15 9605 XP_005254442 15 9605 XP_006714407 15 9605 XP_006714406 15 9605 XP_005263347 15 9605 XP_005263346 15 9605 XP_005263345 15 9605 XP_005263344 15 9605 XP_005263343 15 9605 XP_005263342 15 9605 XP_005263341 15 9605 XP_005263340 15 9605 XP_005263339 15 9605 XP_005273009 15 9605 NP_002364 15 9605 NP_000929 15 9605>NP_000312 Length = 928 Score = 20.8 bits (42), Expect = 229 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RHLDQIMM 8 RHLDQIMM Sbjct: 698 RHLDQIMM 705>NP_005602 Length = 1139 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RHLDQIMM 8 RHLDQ++M Sbjct: 886 RHLDQLLM 893>XP_005256140 Length = 1065 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 RHLDQIMM 8 RHLDQ++M Sbjct: 812 RHLDQLLM 819>NP_620775 Length = 409 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RHLDQIMMF 9 RH DQIM F Sbjct: 104 RHSDQIMTF 112>XP_005263337 Length = 360 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 RHLDQIMMF 9 RH DQIM F Sbjct: 55 RHSDQIMTF 63>NP_899662 Length = 1014 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RHLDQIMM 8 RHLDQ+++ Sbjct: 838 RHLDQLLL 845>NP_002886 Length = 1068 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RHLDQIMM 8 RHLDQ+++ Sbjct: 838 RHLDQLLL 845>XP_006723905 Length = 896 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RHLDQIMM 8 RHLDQ+++ Sbjct: 666 RHLDQLLL 673>NP_006827 Length = 2671 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RHLDQIM 7 RHLDQI+ Sbjct: 704 RHLDQII 710>NP_683710 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 +HLD+I+ F Sbjct: 241 QHLDKILAF 249>XP_006716207 Length = 202 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 +HLD+I+ F Sbjct: 128 QHLDKILAF 136>NP_001138836 Length = 258 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 +HLD+I+ F Sbjct: 184 QHLDKILAF 192>NP_683711 Length = 308 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 +HLD+I+ F Sbjct: 234 QHLDKILAF 242>NP_055498 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 RHL+ ++MF Sbjct: 828 RHLNVMLMF 836>NP_002733 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 HLD+I+M Sbjct: 258 HLDKILM 264>NP_055062 Length = 1499 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1294 HMDQIM 1299>NP_001136082 Length = 1036 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 RHL+ ++MF Sbjct: 828 RHLNVMLMF 836>XP_006721669 Length = 1009 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RHLDQIMMF 9 RHL+ ++MF Sbjct: 801 RHLNVMLMF 809>XP_005267916 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 HLD+I+M Sbjct: 266 HLDKILM 272>XP_006714485 Length = 1585 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1380 HMDQIM 1385>XP_005263418 Length = 1654 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1449 HMDQIM 1454>XP_005263417 Length = 1660 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1455 HMDQIM 1460>XP_006714484 Length = 1685 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1480 HMDQIM 1485>XP_005263416 Length = 1693 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1488 HMDQIM 1493>XP_006714483 Length = 1695 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1490 HMDQIM 1495>XP_005263415 Length = 1701 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HLDQIM 7 H+DQIM Sbjct: 1496 HMDQIM 1501>NP_005614 Length = 99 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RHLDQI 6 +HLDQI Sbjct: 88 KHLDQI 93>NP_055270 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 HLDQIMMF 9 HLD M F Sbjct: 77 HLDHTMFF 84>NP_056127 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>NP_663696 Length = 615 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>NP_653184 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RHLDQI 6 RHLD++ Sbjct: 340 RHLDEV 345>NP_001034451 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RHLDQI 6 RHLD++ Sbjct: 386 RHLDEV 391>NP_079380 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>XP_006722169 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>XP_006722168 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>XP_006722167 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>XP_006722166 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 62 HVDEMMM 68>XP_006722164 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>XP_006722163 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 162 HVDEMMM 168>XP_006722162 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 167 HVDEMMM 173>XP_006722161 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 HLDQIMM 8 H+D++MM Sbjct: 183 HVDEMMM 189>XP_005254442 Length = 3041 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RHLDQI 6 RHLD+I Sbjct: 315 RHLDRI 320>XP_006714407 Length = 5004 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_006714406 Length = 3680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263347 Length = 4640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263346 Length = 4983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263345 Length = 4991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263344 Length = 5005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263343 Length = 5009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263342 Length = 5025 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263341 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263340 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005263339 Length = 5026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 2 HLDQIM 7 HLDQ M Sbjct: 242 HLDQFM 247>XP_005273009 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 HLDQIMMF 9 HLD M F Sbjct: 44 HLDHTMFF 51>NP_002364 Length = 2803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RHLDQI 6 RHLD+I Sbjct: 77 RHLDRI 82>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 RHLDQI 6 RH+DQ+ Sbjct: 638 RHIDQL 643Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.354 0.152 0.481 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,908 Number of extensions: 481 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |