Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 18 1135 NP_001138985 17 4312 NP_055581 17 4312 NP_005581 17 4312 NP_001138987 17 4312 NP_001138986 17 4312 XP_005249975 17 4312 NP_006218 16 5631 NP_872617 16 5631 NP_001229849 16 5631 NP_689472 16 5631 NP_001229850 16 5631 XP_005260496 16 5631 NP_061031 16 7355 NP_057726 16 7355 NP_001273483 16 7355 NP_852607 16 7355 NP_060733 16 7355 XP_006721133 16 7355 XP_005255502 16 7355 XP_005255501 16 7355 XP_005254495 16 7355 XP_006715638 16 7355 XP_005267216 16 7355 XP_006712103 16 7355 XP_006712102 16 7355 XP_006710345 16 7355 XP_006710344 16 7355 XP_006710343 16 7355 XP_006710342 16 7355 XP_006710222 16 7355 XP_006710221 16 7355 XP_001717475 16 7355 NP_001121773 16 7355 NP_006305 16 7355 NP_001121774 16 7355 NP_065157 16 7355 NP_115521 16 7355 NP_001139241 15 9605 NP_001161744 15 9605 NP_004619 15 9605 NP_115791 15 9605 NP_699160 15 9605 NP_588613 15 9605 NP_001008738 15 9605 XP_005252949 15 9605 XP_005252948 15 9605 XP_006715858 15 9605 XP_006715857 15 9605 XP_006713199 15 9605 XP_006713198 15 9605 XP_006713197 15 9605 XP_006713196 15 9605 XP_006713195 15 9605 XP_005265166 15 9605 XP_006713194 15 9605 NP_848632 15 9605>NP_004251 Length = 1208 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 RGRALRS L Sbjct: 365 RGRALRSRL 373>NP_001138985 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 +GR LRST+ Sbjct: 364 QGRKLRSTM 372>NP_055581 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 +GR LRST+ Sbjct: 364 QGRKLRSTM 372>NP_005581 Length = 680 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRALRST 8 RGRA +ST Sbjct: 592 RGRAFKST 599>NP_001138987 Length = 346 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 +GR LRST+ Sbjct: 296 QGRKLRSTM 304>NP_001138986 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 +GR LRST+ Sbjct: 384 QGRKLRSTM 392>XP_005249975 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 +GR LRST+ Sbjct: 364 QGRKLRSTM 372>NP_006218 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 RG+ALR+ L Sbjct: 380 RGKALRTQL 388>NP_872617 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 RG+ALR+ L Sbjct: 328 RGKALRTQL 336>NP_001229849 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 RG+ALR+ L Sbjct: 285 RGKALRTQL 293>NP_689472 Length = 1910 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGRALRST 8 RGR LRS+ Sbjct: 623 RGRTLRSS 630>NP_001229850 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 RG+ALR+ L Sbjct: 292 RGKALRTQL 300>XP_005260496 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 RG+ALR+ L Sbjct: 400 RGKALRTQL 408>NP_061031 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 113 RGRTLRS 119>NP_057726 Length = 3674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGRALRST 8 RG ALR T Sbjct: 1829 RGHALRDT 1836>NP_001273483 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 113 RGRTLRS 119>NP_852607 Length = 622 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RGRALR 6 RGRALR Sbjct: 392 RGRALR 397>NP_060733 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RGRALRST 8 RG+A+RS+ Sbjct: 1278 RGKAIRSS 1285>XP_006721133 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 96 RGRGLRS 102>XP_005255502 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 96 RGRGLRS 102>XP_005255501 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 96 RGRGLRS 102>XP_005254495 Length = 3694 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGRALRST 8 RG ALR T Sbjct: 1849 RGHALRDT 1856>XP_006715638 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GRALRSTL 9 GR+LRS L Sbjct: 734 GRSLRSVL 741>XP_005267216 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GRALRSTL 9 GR+LRS L Sbjct: 734 GRSLRSVL 741>XP_006712103 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RGRALRST 8 RG+A+RS+ Sbjct: 1018 RGKAIRSS 1025>XP_006712102 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RGRALRST 8 RG+A+RS+ Sbjct: 1156 RGKAIRSS 1163>XP_006710345 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 R RAL+STL Sbjct: 357 RVRALQSTL 365>XP_006710344 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 R RAL+STL Sbjct: 622 RVRALQSTL 630>XP_006710343 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 R RAL+STL Sbjct: 656 RVRALQSTL 664>XP_006710342 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 R RAL+STL Sbjct: 663 RVRALQSTL 671>XP_006710222 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGRALRSTL 9 RG LR+TL Sbjct: 106 RGNLLRATL 114>XP_006710221 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGRALRSTL 9 RG LR+TL Sbjct: 106 RGNLLRATL 114>XP_001717475 Length = 1826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGRALRSTL 9 RG LR+TL Sbjct: 139 RGNLLRATL 147>NP_001121773 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 96 RGRGLRS 102>NP_006305 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 RGRALRSTL 9 R RAL+STL Sbjct: 615 RVRALQSTL 623>NP_001121774 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 96 RGRGLRS 102>NP_065157 Length = 122 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 96 RGRGLRS 102>NP_115521 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GRALRSTL 9 GR+LRS L Sbjct: 734 GRSLRSVL 741>NP_001139241 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 12 RGRELRS 18>NP_001161744 Length = 2743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1725 RGEALRQVL 1733>NP_004619 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGRALRS 7 RGR LRS Sbjct: 12 RGRELRS 18>NP_115791 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RALRSTL 9 RALR+TL Sbjct: 866 RALRNTL 872>NP_699160 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GRALRSTL 9 GRALR +L Sbjct: 255 GRALRRSL 262>NP_588613 Length = 1166 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GRALRST 8 G+A+RST Sbjct: 719 GKAMRST 725>NP_001008738 Length = 1138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GRALRST 8 G+A+RST Sbjct: 691 GKAMRST 697>XP_005252949 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGRALRSTL 9 +GRALR L Sbjct: 38 QGRALRQRL 46>XP_005252948 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGRALRSTL 9 +GRALR L Sbjct: 38 QGRALRQRL 46>XP_006715858 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RALRSTL 9 RALR+TL Sbjct: 979 RALRNTL 985>XP_006715857 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RALRSTL 9 RALR+TL Sbjct: 980 RALRNTL 986>XP_006713199 Length = 2695 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1718 RGEALRQVL 1726>XP_006713198 Length = 2699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1718 RGEALRQVL 1726>XP_006713197 Length = 2712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1694 RGEALRQVL 1702>XP_006713196 Length = 2721 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1703 RGEALRQVL 1711>XP_006713195 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1709 RGEALRQVL 1717>XP_005265166 Length = 2735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1717 RGEALRQVL 1725>XP_006713194 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGRALRSTL 9 RG ALR L Sbjct: 1718 RGEALRQVL 1726>NP_848632 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGRALRSTL 9 +GRALR L Sbjct: 38 QGRALRQRL 46Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.137 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 345,045 Number of extensions: 399 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |