Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_056453 17 3301 NP_955400 17 3301 NP_001229416 17 3301 NP_001229417 17 3301 NP_055852 17 3301 XP_005269712 17 3301 XP_006717788 17 3301 XP_005269710 17 3301 XP_005269709 17 3301 XP_005269708 17 3301 XP_005269706 17 3301 XP_005269705 17 3301 NP_001268451 16 5631 NP_001268449 16 5631 NP_877954 16 5631 NP_001268450 16 5631 NP_115874 16 5631 XP_005260916 16 5631 NP_958441 16 7355 NP_958439 16 7355 NP_005219 16 7355 NP_001184033 16 7355 NP_005924 16 7355 NP_001699 16 7355 NP_001035514 16 7355 NP_001269863 16 7355 NP_071398 16 7355 XP_006724103 16 7355 XP_006724102 16 7355 XP_006718903 16 7355 XP_006718902 16 7355 NP_001138384 15 9605 NP_001129503 15 9605 NP_006386 15 9605 NP_940867 15 9605 NP_055928 15 9605 NP_004456 15 9605 NP_002354 15 9605 NP_803134 15 9605 NP_775970 15 9605 NP_002358 15 9605 NP_056073 15 9605 NP_004704 15 9605 NP_002355 15 9605 NP_796379 15 9605 NP_872312 15 9605 XP_006724697 15 9605 XP_006724696 15 9605 XP_006724695 15 9605 XP_006724694 15 9605 XP_006721548 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_005268258 15 9605 XP_005268257 15 9605 XP_005268256 15 9605 XP_006717082 15 9605 XP_006717081 15 9605 XP_005248321 15 9605 XP_006712999 15 9605 XP_005264860 15 9605 XP_006712998 15 9605 XP_006712997 15 9605 XP_006712996 15 9605 XP_006712995 15 9605 XP_006712994 15 9605 NP_001138526 15 9605>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 RGQKTKV T Sbjct: 374 RGQKTKVCT 382>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 RGQKTKV T Sbjct: 374 RGQKTKVCT 382>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 RGQKTKV T Sbjct: 374 RGQKTKVCT 382>NP_056453 Length = 797 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RGQK K+S Sbjct: 152 RGQKLKIS 159>NP_955400 Length = 789 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RGQK K+S Sbjct: 152 RGQKLKIS 159>NP_001229416 Length = 1837 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>NP_001229417 Length = 1892 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>NP_055852 Length = 1842 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>XP_005269712 Length = 1800 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 781 KGKKNKVST 789>XP_006717788 Length = 1829 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>XP_005269710 Length = 1834 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>XP_005269709 Length = 1871 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 781 KGKKNKVST 789>XP_005269708 Length = 1897 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>XP_005269706 Length = 1900 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>XP_005269705 Length = 1905 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 +G+K KVST Sbjct: 815 KGKKNKVST 823>NP_001268451 Length = 793 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 +GQKTK S Sbjct: 366 KGQKTKSS 373>NP_001268449 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 +GQKTK S Sbjct: 366 KGQKTKSS 373>NP_877954 Length = 824 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 +GQKTK S Sbjct: 350 KGQKTKSS 357>NP_001268450 Length = 880 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 +GQKTK S Sbjct: 366 KGQKTKSS 373>NP_115874 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 +GQKTK S Sbjct: 366 KGQKTKSS 373>XP_005260916 Length = 581 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 +GQKTK S Sbjct: 366 KGQKTKSS 373>NP_958441 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GQKTKV 7 GQKTK+ Sbjct: 485 GQKTKI 490>NP_958439 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GQKTKV 7 GQKTK+ Sbjct: 485 GQKTKI 490>NP_005219 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GQKTKV 7 GQKTK+ Sbjct: 485 GQKTKI 490>NP_001184033 Length = 3972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 +G+KTKV Sbjct: 2307 KGEKTKV 2313>NP_005924 Length = 3969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 +G+KTKV Sbjct: 2304 KGEKTKV 2310>NP_001699 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 QKTKVST 9 QKT+VST Sbjct: 333 QKTEVST 339>NP_001035514 Length = 1178 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RG+K KVS Sbjct: 305 RGRKPKVS 312>NP_001269863 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RG+K KVS Sbjct: 305 RGRKPKVS 312>NP_071398 Length = 1507 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RG+K KVS Sbjct: 634 RGRKPKVS 641>XP_006724103 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RG+K KVS Sbjct: 305 RGRKPKVS 312>XP_006724102 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGQKTKVS 8 RG+K KVS Sbjct: 305 RGRKPKVS 312>XP_006718903 Length = 2673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 +G+KTKV Sbjct: 1008 KGEKTKV 1014>XP_006718902 Length = 2964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 +G+KTKV Sbjct: 1299 KGEKTKV 1305>NP_001138384 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 182 QGQRTKIT 189>NP_001129503 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>NP_006386 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>NP_940867 Length = 1582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 R +K+KVST Sbjct: 682 REKKSKVST 690>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGQKTKVST 9 RG+KT+ T Sbjct: 1144 RGRKTRYDT 1152>NP_004456 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGQKTK 6 RGQKT+ Sbjct: 188 RGQKTR 193>NP_002354 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>NP_803134 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>NP_775970 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>NP_002358 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>NP_056073 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGQKTKV 7 RGQ TKV Sbjct: 684 RGQLTKV 690>NP_004704 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 870 RGQKSKM 876>NP_002355 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>NP_796379 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>NP_872312 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 3 RGQKSKL 9>XP_006724697 Length = 1526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 R +K+KVST Sbjct: 682 REKKSKVST 690>XP_006724696 Length = 1534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 R +K+KVST Sbjct: 682 REKKSKVST 690>XP_006724695 Length = 1574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 R +K+KVST Sbjct: 682 REKKSKVST 690>XP_006724694 Length = 1582 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGQKTKVST 9 R +K+KVST Sbjct: 682 REKKSKVST 690>XP_006721548 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGQKTKVST 9 RG+KT+ T Sbjct: 65 RGRKTRYDT 73>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGQKTKVST 9 RG+KT+ T Sbjct: 1145 RGRKTRYDT 1153>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGQKTKVST 9 RG+KT+ T Sbjct: 1145 RGRKTRYDT 1153>XP_005268258 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 641 RGQKSKM 647>XP_005268257 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 656 RGQKSKM 662>XP_005268256 Length = 1055 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RGQKTKV 7 RGQK+K+ Sbjct: 849 RGQKSKM 855>XP_006717082 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGQKTKV 7 RGQ TKV Sbjct: 616 RGQLTKV 622>XP_006717081 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGQKTKV 7 RGQ TKV Sbjct: 674 RGQLTKV 680>XP_005248321 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGQKTK 6 RGQKT+ Sbjct: 188 RGQKTR 193>XP_006712999 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>XP_005264860 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>XP_006712998 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>XP_006712997 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>XP_006712996 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>XP_006712995 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>XP_006712994 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 RGQKTKVS 8 +GQ+TK++ Sbjct: 221 QGQRTKIT 228>NP_001138526 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGQKTK 6 RG+KTK Sbjct: 383 RGEKTK 388Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.299 0.112 0.276 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 449,805 Number of extensions: 401 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |