Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 22 79 XP_005271924 22 79 XP_005271923 22 79 NP_444507 19 869 XP_006724088 19 869 NP_065744 17 2528 NP_001036037 17 3301 NP_001262 17 3301 NP_001012985 17 4312 XP_005263404 17 4312 XP_005263403 17 4312 XP_006714474 17 4312 XP_006714473 17 4312 XP_006714472 17 4312 XP_005263402 17 4312 XP_005263401 17 4312 XP_005263399 17 4312 XP_005263400 17 4312 XP_006714471 17 4312 XP_005263398 17 4312 NP_065861 16 5631 NP_037535 16 5631 NP_001034966 16 5631 NP_001846 16 5631 NP_112211 16 5631 XP_006723237 16 5631 XP_006723236 16 5631 XP_006723235 16 5631 XP_006723234 16 5631 XP_005267973 16 5631 XP_005267209 16 5631 NP_647479 16 7355 NP_758963 16 7355 NP_001242952 16 7355 NP_058625 16 7355 NP_061990 16 7355 NP_001107558 16 7355 NP_758872 16 7355 NP_476503 16 7355 NP_002229 16 7355 XP_006718871 16 7355 XP_006715178 16 7355 XP_006715177 16 7355 XP_005248127 16 7355 XP_005248126 16 7355 XP_005248125 16 7355 XP_005248124 16 7355 XP_005248123 16 7355 XP_005248122 16 7355 XP_005248121 16 7355 XP_005248120 16 7355 XP_006714059 16 7355 XP_005248119 16 7355 XP_005248118 16 7355 XP_005248117 16 7355 XP_005248116 16 7355 XP_005248115 16 7355 XP_005248114 16 7355 NP_835228 16 7355 NP_000229 15 9605 NP_001191727 15 9605 NP_742053 15 9605 NP_742054 15 9605 NP_000160 15 9605 NP_005492 15 9605 NP_002195 15 9605 NP_055928 15 9605 NP_150375 15 9605 NP_065845 15 9605 NP_110406 15 9605 NP_001265848 15 9605 NP_001265849 15 9605 NP_775115 15 9605 NP_775185 15 9605 XP_005257365 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 XP_006716040 15 9605 XP_005271970 15 9605 XP_006710845 15 9605>NP_001261 Length = 1710 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RGMRKLDNY 9 RGM+KLDNY Sbjct: 344 RGMKKLDNY 352>XP_005271924 Length = 1710 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RGMRKLDNY 9 RGM+KLDNY Sbjct: 344 RGMKKLDNY 352>XP_005271923 Length = 1798 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RGMRKLDNY 9 RGM+KLDNY Sbjct: 344 RGMKKLDNY 352>NP_444507 Length = 686 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + +RKLDNY Sbjct: 580 KALRKLDNY 588>XP_006724088 Length = 646 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + +RKLDNY Sbjct: 540 KALRKLDNY 548>NP_065744 Length = 2113 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 RGM K NY Sbjct: 1215 RGMEKFTNY 1223>NP_001036037 Length = 501 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RGMRKLDNY 9 +G++KL+N+ Sbjct: 333 KGLKKLENF 341>NP_001262 Length = 1828 Score = 16.9 bits (32), Expect = 3301 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RGMRKLDNY 9 +G++KL+N+ Sbjct: 333 KGLKKLENF 341>NP_001012985 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263404 Length = 1308 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263403 Length = 1672 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714474 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714473 Length = 1675 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714472 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263402 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263401 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263399 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263400 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714471 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263398 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GMRKLDNY 9 G+RKL++Y Sbjct: 604 GIRKLEDY 611>NP_065861 Length = 509 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGMRKLD 7 RGM KLD Sbjct: 80 RGMTKLD 86>NP_037535 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG+R LDN Sbjct: 659 RGIRFLDN 666>NP_001034966 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG+R LDN Sbjct: 666 RGIRFLDN 673>NP_001846 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMRKLDNY 9 G+R +DNY Sbjct: 1331 GVRLVDNY 1338>NP_112211 Length = 165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RGMRKL 6 RGMRKL Sbjct: 152 RGMRKL 157>XP_006723237 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG+R LDN Sbjct: 547 RGIRFLDN 554>XP_006723236 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG+R LDN Sbjct: 562 RGIRFLDN 569>XP_006723235 Length = 768 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG+R LDN Sbjct: 674 RGIRFLDN 681>XP_006723234 Length = 775 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG+R LDN Sbjct: 681 RGIRFLDN 688>XP_005267973 Length = 537 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGMRKLD 7 RGM KLD Sbjct: 108 RGMTKLD 114>XP_005267209 Length = 108 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RGMRKL 6 RGMRKL Sbjct: 95 RGMRKL 100>NP_647479 Length = 988 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGMRKLDNY 9 R RKLD+Y Sbjct: 333 RVARKLDHY 341>NP_758963 Length = 611 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGMRKLDNY 9 R RKLD+Y Sbjct: 333 RVARKLDHY 341>NP_001242952 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + ++KLD+Y Sbjct: 143 KALKKLDDY 151>NP_058625 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + ++KLD+Y Sbjct: 143 KALKKLDDY 151>NP_061990 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MRKLDNY 9 +RK++NY Sbjct: 169 LRKMENY 175>NP_001107558 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + ++KLD+Y Sbjct: 302 KALKKLDDY 310>NP_758872 Length = 989 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGMRKLDNY 9 R RKLD+Y Sbjct: 363 RVARKLDHY 371>NP_476503 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 MRKLDNY 9 +RK++NY Sbjct: 169 LRKMENY 175>NP_002229 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGMRKLDNY 9 R RKLD+Y Sbjct: 336 RVARKLDHY 344>XP_006718871 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG++K DN Sbjct: 222 RGLKKEDN 229>XP_006715178 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + ++KLD+Y Sbjct: 143 KALKKLDDY 151>XP_006715177 Length = 212 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RGMRKLDNY 9 + ++KLD+Y Sbjct: 143 KALKKLDDY 151>XP_005248127 Length = 1322 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248126 Length = 1359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 529 KGQRKLDD 536>XP_005248125 Length = 1439 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 609 KGQRKLDD 616>XP_005248124 Length = 1467 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 641 KGQRKLDD 648>XP_005248123 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 641 KGQRKLDD 648>XP_005248122 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 641 KGQRKLDD 648>XP_005248121 Length = 1543 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 713 KGQRKLDD 720>XP_005248120 Length = 1549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 719 KGQRKLDD 726>XP_006714059 Length = 1600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248119 Length = 1601 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248118 Length = 1602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248117 Length = 1626 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248116 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248115 Length = 1629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>XP_005248114 Length = 1630 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 +G RKLD+ Sbjct: 800 KGQRKLDD 807>NP_835228 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGMRKLDN 8 RG++K DN Sbjct: 287 RGLKKEDN 294>NP_000229 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 534 RVARKLDRY 542>NP_001191727 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 194 RVARKLDRY 202>NP_742053 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 534 RVARKLDRY 542>NP_742054 Length = 819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 194 RVARKLDRY 202>NP_000160 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GMRKLDNY 9 G+R+L NY Sbjct: 116 GIRQLANY 123>NP_005492 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMRKLDNY 9 G+R LD Y Sbjct: 587 GLRSLDAY 594>NP_002195 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMRKLDNY 9 G+R LD Y Sbjct: 587 GLRSLDAY 594>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GMRKLD 7 G+RKLD Sbjct: 1075 GLRKLD 1080>NP_150375 Length = 1196 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 536 RVARKLDRY 544>NP_065845 Length = 1537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 +G R +D Y Sbjct: 1435 KGQRSMDGY 1443>NP_110406 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 385 RVARKLDRY 393>NP_001265848 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 385 RVARKLDRY 393>NP_001265849 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 262 RVARKLDRY 270>NP_775115 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 385 RVARKLDRY 393>NP_775185 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 529 RVARKLDRY 537>XP_005257365 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GMRKLDNY 9 G+R LD Y Sbjct: 452 GLRSLDAY 459>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GMRKLD 7 G+RKLD Sbjct: 1076 GLRKLD 1081>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GMRKLD 7 G+RKLD Sbjct: 1076 GLRKLD 1081>XP_006716040 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 R RKLD Y Sbjct: 534 RVARKLDRY 542>XP_005271970 Length = 2931 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 RG +K NY Sbjct: 2899 RGFKKARNY 2907>XP_006710845 Length = 1492 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 RGMRKLDNY 9 +G R +D Y Sbjct: 1390 KGQRSMDGY 1398Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.145 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 534,650 Number of extensions: 805 Number of successful extensions: 80 Number of sequences better than 10000.0: 80 Number of HSP's gapped: 80 Number of HSP's successfully gapped: 80 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |