Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 18 1135 NP_001035957 18 1135 XP_006721991 18 1135 XP_006721990 18 1135 XP_006721989 18 1135 XP_005258041 18 1135 XP_006721988 18 1135 XP_006721987 18 1135 XP_006721986 18 1135 XP_005258040 18 1135 XP_006721985 18 1135 NP_001253969 16 7355 NP_004964 16 7355 XP_005249146 16 7355 NP_060469 16 7355 NP_056099 15 9605 NP_001159711 15 9605 NP_006560 15 9605 NP_001159712 15 9605 XP_006710565 15 9605 XP_006710564 15 9605 XP_005270743 15 9605 NP_789791 15 9605>NP_000258 Length = 2818 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1416 RGLKLMSKI 1424>NP_001035957 Length = 2839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1437 RGLKLMSKI 1445>XP_006721991 Length = 1632 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1447 RGLKLMSKI 1455>XP_006721990 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1447 RGLKLMSKI 1455>XP_006721989 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1447 RGLKLMSKI 1455>XP_005258041 Length = 2836 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1416 RGLKLMSKI 1424>XP_006721988 Length = 2846 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1426 RGLKLMSKI 1434>XP_006721987 Length = 2849 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1447 RGLKLMSKI 1455>XP_006721986 Length = 2854 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1434 RGLKLMSKI 1442>XP_005258040 Length = 2857 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1437 RGLKLMSKI 1445>XP_006721985 Length = 2867 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGLKLMSMI 9 RGLKLMS I Sbjct: 1447 RGLKLMSKI 1455>NP_001253969 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RGLKLM 6 RGLKLM Sbjct: 1004 RGLKLM 1009>NP_004964 Length = 1246 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RGLKLM 6 RGLKLM Sbjct: 1176 RGLKLM 1181>XP_005249146 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RGLKLM 6 RGLKLM Sbjct: 1004 RGLKLM 1009>NP_060469 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 GLKLMSMI 9 GL+L+SMI Sbjct: 488 GLQLVSMI 495>NP_056099 Length = 3375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGLKLMS 7 RGL LMS Sbjct: 1794 RGLSLMS 1800>NP_001159711 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLKLMSMI 9 GL+L+SM+ Sbjct: 91 GLELLSML 98>NP_006560 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLKLMSMI 9 GL+L+SM+ Sbjct: 91 GLELLSML 98>NP_001159712 Length = 132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GLKLMSMI 9 GL+L+SM+ Sbjct: 91 GLELLSML 98>XP_006710565 Length = 3140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGLKLMS 7 RGL LMS Sbjct: 1559 RGLSLMS 1565>XP_006710564 Length = 3432 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGLKLMS 7 RGL LMS Sbjct: 1851 RGLSLMS 1857>XP_005270743 Length = 3453 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RGLKLMS 7 RGL LMS Sbjct: 1872 RGLSLMS 1878>NP_789791 Length = 655 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 RGLKLMSMI 9 +GLK+M+++ Sbjct: 76 KGLKVMNLL 84Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.147 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 281,877 Number of extensions: 153 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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