Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 21 229 NP_000170 21 229 NP_001268422 21 229 NP_001268423 21 229 XP_005264328 21 229 NP_001073892 17 2528 NP_775912 17 3301 NP_001092909 17 3301 NP_835235 17 4312 XP_005274112 17 4312 NP_060563 17 4312 NP_000543 16 5631 NP_001161820 16 5631 NP_001161819 16 5631 NP_683759 16 5631 NP_060514 16 5631 NP_001269221 16 5631 NP_009119 16 5631 NP_001269220 16 5631 NP_001269222 16 5631 NP_001191088 16 7355 NP_001191089 16 7355 NP_064511 16 7355 NP_001230805 16 7355 NP_001191087 16 7355 NP_005594 16 7355 NP_001018066 16 7355 NP_003374 16 7355 NP_002449 16 7355 NP_055572 16 7355 NP_000578 16 7355 XP_006723357 16 7355 XP_006723356 16 7355 XP_006723355 16 7355 XP_006723354 16 7355 XP_006723353 16 7355 XP_006722545 16 7355 XP_006722544 16 7355 XP_006716928 16 7355 XP_006716927 16 7355 NP_001185480 15 9605 NP_077742 15 9605 NP_077744 15 9605 NP_001185481 15 9605 NP_000369 15 9605 NP_006311 15 9605 NP_006658 15 9605 NP_001238892 15 9605 NP_001025053 15 9605 NP_061159 15 9605 NP_001177874 15 9605 NP_733828 15 9605 NP_001177876 15 9605 NP_005649 15 9605 NP_001238891 15 9605 NP_001138341 15 9605 NP_056410 15 9605 NP_062547 15 9605 NP_851782 15 9605 NP_006848 15 9605 XP_006725061 15 9605 XP_006720683 15 9605 XP_005254625 15 9605 XP_005254624 15 9605 XP_006709992 15 9605 XP_005262782 15 9605 XP_006714141 15 9605 XP_005262780 15 9605 XP_005262779 15 9605 XP_005245910 15 9605 XP_005245909 15 9605 XP_005245908 15 9605 XP_005245907 15 9605 XP_005245906 15 9605 XP_005245905 15 9605 NP_001397 15 9605>NP_001268421 Length = 1230 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGIATFDGT 9 RG ATFDGT Sbjct: 1087 RGTATFDGT 1095>NP_000170 Length = 1360 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGIATFDGT 9 RG ATFDGT Sbjct: 1217 RGTATFDGT 1225>NP_001268422 Length = 1058 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGIATFDGT 9 RG ATFDGT Sbjct: 915 RGTATFDGT 923>NP_001268423 Length = 1058 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGIATFDGT 9 RG ATFDGT Sbjct: 915 RGTATFDGT 923>XP_005264328 Length = 1261 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RGIATFDGT 9 RG ATFDGT Sbjct: 1118 RGTATFDGT 1126>NP_001073892 Length = 1140 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GIATFDGT 9 GIAT DGT Sbjct: 610 GIATEDGT 617>NP_775912 Length = 295 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGIATFDGT 9 RG+ATF T Sbjct: 216 RGLATFPAT 224>NP_001092909 Length = 1008 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGIATFDGT 9 RG+ATF T Sbjct: 216 RGLATFPAT 224>NP_835235 Length = 505 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGIATFDGT 9 RG+ T DG+ Sbjct: 123 RGLVTLDGS 131>XP_005274112 Length = 385 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGIATFDGT 9 RG+A DGT Sbjct: 91 RGLAQADGT 99>NP_060563 Length = 385 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RGIATFDGT 9 RG+A DGT Sbjct: 91 RGLAQADGT 99>NP_000543 Length = 2813 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 R I TFDG Sbjct: 1956 RHIVTFDG 1963>NP_001161820 Length = 391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGIATFDG 8 RG++TF G Sbjct: 355 RGLSTFPG 362>NP_001161819 Length = 470 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGIATFDG 8 RG++TF G Sbjct: 393 RGLSTFPG 400>NP_683759 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGIATFDG 8 RG++TF G Sbjct: 393 RGLSTFPG 400>NP_060514 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RGIATFDG 8 RG++TF G Sbjct: 393 RGLSTFPG 400>NP_001269221 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGIA F G Sbjct: 356 RGIALFQG 363>NP_009119 Length = 718 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGIA F G Sbjct: 356 RGIALFQG 363>NP_001269220 Length = 735 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGIA F G Sbjct: 373 RGIALFQG 380>NP_001269222 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGIA F G Sbjct: 268 RGIALFQG 275>NP_001191088 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 616 RGVLTVDG 623>NP_001191089 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 580 RGVLTVDG 587>NP_064511 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 616 RGVLTVDG 623>NP_001230805 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 410 RGVLTVDG 417>NP_001191087 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 557 RGVLTVDG 564>NP_005594 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IATFDG 8 +ATFDG Sbjct: 256 LATFDG 261>NP_001018066 Length = 845 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IATFDGT 9 +AT DGT Sbjct: 539 VATLDGT 545>NP_003374 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IATFDGT 9 +AT DGT Sbjct: 539 VATLDGT 545>NP_002449 Length = 5762 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 +TFDGT Sbjct: 5084 STFDGT 5089>NP_055572 Length = 1016 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 RGIATFDGT 9 RG+A F G+ Sbjct: 740 RGVAQFPGS 748>NP_000578 Length = 843 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GIATFDGT 9 G+AT +GT Sbjct: 464 GLATVEGT 471>XP_006723357 Length = 448 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 410 RGVLTVDG 417>XP_006723356 Length = 595 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 557 RGVLTVDG 564>XP_006723355 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 580 RGVLTVDG 587>XP_006723354 Length = 654 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 616 RGVLTVDG 623>XP_006723353 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RG+ T DG Sbjct: 678 RGVLTVDG 685>XP_006722545 Length = 982 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IATFDG 8 +ATFDG Sbjct: 256 LATFDG 261>XP_006722544 Length = 1251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IATFDG 8 +ATFDG Sbjct: 256 LATFDG 261>XP_006716928 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IATFDGT 9 +AT DGT Sbjct: 544 VATLDGT 550>XP_006716927 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IATFDGT 9 +AT DGT Sbjct: 544 VATLDGT 550>NP_001185480 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TFDGT 9 TFDGT Sbjct: 9 TFDGT 13>NP_077742 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TFDGT 9 TFDGT Sbjct: 221 TFDGT 225>NP_077744 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TFDGT 9 TFDGT Sbjct: 221 TFDGT 225>NP_001185481 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TFDGT 9 TFDGT Sbjct: 9 TFDGT 13>NP_000369 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TFDGT 9 TFDGT Sbjct: 221 TFDGT 225>NP_006311 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 177 RGLATF 182>NP_006658 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 123 RGLATF 128>NP_001238892 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 +G TFDG Sbjct: 366 KGQGTFDG 373>NP_001025053 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>NP_061159 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGI +DG Sbjct: 876 RGIQLYDG 883>NP_001177874 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 263 ASFDGT 268>NP_733828 Length = 1322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 412 ASFDGT 417>NP_001177876 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 141 ASFDGT 146>NP_005649 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 263 ASFDGT 268>NP_001238891 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 +G TFDG Sbjct: 366 KGQGTFDG 373>NP_001138341 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GIATFDG 8 G+ATF G Sbjct: 87 GLATFHG 93>NP_056410 Length = 871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 +G TFDG Sbjct: 366 KGQGTFDG 373>NP_062547 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 TFDGT 9 TFDGT Sbjct: 457 TFDGT 461>NP_851782 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 388 ASFDGT 393>NP_006848 Length = 155 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 GIATFDGT 9 G A+FD T Sbjct: 108 GFASFDST 115>XP_006725061 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 +G TFDG Sbjct: 366 KGQGTFDG 373>XP_006720683 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGI +DG Sbjct: 319 RGIQLYDG 326>XP_005254625 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGI +DG Sbjct: 876 RGIQLYDG 883>XP_005254624 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGI +DG Sbjct: 876 RGIQLYDG 883>XP_006709992 Length = 1311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RGIATFDG 8 RGIA DG Sbjct: 805 RGIANKDG 812>XP_005262782 Length = 1216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 314 ASFDGT 319>XP_006714141 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 412 ASFDGT 417>XP_005262780 Length = 1307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 412 ASFDGT 417>XP_005262779 Length = 1314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATFDGT 9 A+FDGT Sbjct: 412 ASFDGT 417>XP_005245910 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>XP_005245909 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>XP_005245908 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>XP_005245907 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>XP_005245906 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>XP_005245905 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RGIATF 6 RG+ATF Sbjct: 883 RGLATF 888>NP_001397 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IATFDGT 9 IAT DGT Sbjct: 138 IATSDGT 144Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.145 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 591,295 Number of extensions: 1281 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |