Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_733751                                                              20     390
XP_006716142                                                           20     390
XP_005250088                                                           20     390
XP_006716141                                                           20     390
XP_005250085                                                           20     390
XP_006716140                                                           20     390
XP_005250084                                                           20     390
XP_005250083                                                           20     390
XP_005250082                                                           20     390
NP_938026                                                              17    2528
NP_001271191                                                           17    2528
XP_005250047                                                           17    2528
NP_001244931                                                           17    4312
NP_001244930                                                           17    4312
NP_970615                                                              17    4312
NP_001244933                                                           17    4312
NP_001244934                                                           17    4312
NP_001073876                                                           17    4312
NP_001244932                                                           17    4312
NP_001035713                                                           17    4312
NP_068569                                                              17    4312
XP_006718823                                                           17    4312
XP_006710640                                                           17    4312
NP_060570                                                              16    5631
NP_001165891                                                           16    5631
NP_001188358                                                           16    5631
NP_036427                                                              16    5631
NP_001186210                                                           16    5631
NP_057363                                                              16    5631
XP_006724247                                                           16    5631
XP_006724246                                                           16    5631
XP_006724245                                                           16    5631
XP_006724244                                                           16    5631
XP_006724243                                                           16    5631
XP_005261477                                                           16    5631
XP_005261476                                                           16    5631
XP_005261474                                                           16    5631
XP_006724242                                                           16    5631
XP_005261473                                                           16    5631
XP_005261472                                                           16    5631
NP_004666                                                              16    7355
NP_055472                                                              16    7355
NP_071411                                                              16    7355
XP_005260678                                                           16    7355
XP_006711090                                                           16    7355
NP_000161                                                              15    9605
NP_001269158                                                           15    9605
NP_001269155                                                           15    9605
NP_001269156                                                           15    9605
NP_803124                                                              15    9605
NP_001269154                                                           15    9605
NP_001269157                                                           15    9605
NP_000480                                                              15    9605
NP_612114                                                              15    9605
NP_003027                                                              15    9605
NP_001191790                                                           15    9605
NP_001191791                                                           15    9605
NP_001191788                                                           15    9605
NP_005639                                                              15    9605
NP_001191792                                                           15    9605
NP_001191789                                                           15    9605
NP_001269480                                                           15    9605
NP_001191787                                                           15    9605
NP_001191793                                                           15    9605
NP_001269479                                                           15    9605
NP_001191786                                                           15    9605
NP_055777                                                              15    9605
NP_001129610                                                           15    9605
NP_001274150                                                           15    9605
NP_001274148                                                           15    9605
NP_001274147                                                           15    9605
NP_004696                                                              15    9605
NP_036556                                                              15    9605
NP_852108                                                              15    9605
XP_006724730                                                           15    9605
XP_005262214                                                           15    9605
XP_005262213                                                           15    9605
XP_006724729                                                           15    9605
XP_005262212                                                           15    9605
XP_005262211                                                           15    9605
XP_005262210                                                           15    9605
XP_006724143                                                           15    9605
XP_006723614                                                           15    9605
XP_006723613                                                           15    9605
XP_005251347                                                           15    9605
XP_005273155                                                           15    9605
XP_005273153                                                           15    9605
XP_006711335                                                           15    9605
XP_005273152                                                           15    9605
XP_005244832                                                           15    9605
>NP_733751
          Length = 4911

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4864 RGHKIIISS 4872
>XP_006716142
          Length = 4927

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4880 RGHKIIISS 4888
>XP_005250088
          Length = 4928

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4881 RGHKIIISS 4889
>XP_006716141
          Length = 4959

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4912 RGHKIIISS 4920
>XP_005250085
          Length = 4979

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4932 RGHKIIISS 4940
>XP_006716140
          Length = 4982

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4935 RGHKIIISS 4943
>XP_005250084
          Length = 4982

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4935 RGHKIIISS 4943
>XP_005250083
          Length = 4982

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4935 RGHKIIISS 4943
>XP_005250082
          Length = 4983

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    RGHKFIISS 9
            RGHK IISS
Sbjct: 4936 RGHKIIISS 4944
>NP_938026
          Length = 376

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RGHKFIIS 8
           RGH FII+
Sbjct: 312 RGHTFIIN 319
>NP_001271191
          Length = 248

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RGHKFIIS 8
           RGH FII+
Sbjct: 184 RGHTFIIN 191
>XP_005250047
          Length = 327

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   RGHKFIIS 8
           RGH FII+
Sbjct: 312 RGHTFIIN 319
>NP_001244931
          Length = 315

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 107 GHNFILSN 114
>NP_001244930
          Length = 368

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 160 GHNFILSN 167
>NP_970615
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 268 GHNFILSN 275
>NP_001244933
          Length = 315

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 107 GHNFILSN 114
>NP_001244934
          Length = 315

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 107 GHNFILSN 114
>NP_001073876
          Length = 653

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GHKF+I
Sbjct: 84 GHKFLI 89
>NP_001244932
          Length = 368

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 160 GHNFILSN 167
>NP_001035713
          Length = 315

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 107 GHNFILSN 114
>NP_068569
          Length = 368

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 160 GHNFILSN 167
>XP_006718823
          Length = 1011

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF+I
Sbjct: 442 GHKFLI 447
>XP_006710640
          Length = 315

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH FI+S+
Sbjct: 107 GHNFILSN 114
>NP_060570
          Length = 640

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GH+FII
Sbjct: 500 GHRFII 505
>NP_001165891
          Length = 621

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GH+FII
Sbjct: 481 GHRFII 486
>NP_001188358
          Length = 2170

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 446 GHKFLV 451
>NP_036427
          Length = 2220

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>NP_001186210
          Length = 2220

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>NP_057363
          Length = 789

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 1   RGHKF 5
           RGHKF
Sbjct: 519 RGHKF 523
>XP_006724247
          Length = 1189

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_006724246
          Length = 2103

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_006724245
          Length = 2191

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_006724244
          Length = 2191

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_006724243
          Length = 2196

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_005261477
          Length = 2200

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_005261476
          Length = 2210

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 451 GHKFLV 456
>XP_005261474
          Length = 2225

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_006724242
          Length = 2226

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_005261473
          Length = 2250

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>XP_005261472
          Length = 2255

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   GHKFII 7
           GHKF++
Sbjct: 496 GHKFLV 501
>NP_004666
          Length = 229

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   RGHKFII 7
           RGH F++
Sbjct: 108 RGHAFVL 114
>NP_055472
          Length = 1089

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   RGHKFIISS 9
           +GH  ++SS
Sbjct: 227 QGHSIVVSS 235
>NP_071411
          Length = 322

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 2  GHKFII 7
          GHKF I
Sbjct: 44 GHKFFI 49
>XP_005260678
          Length = 1089

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   RGHKFIISS 9
           +GH  ++SS
Sbjct: 227 QGHSIVVSS 235
>XP_006711090
          Length = 229

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 1   RGHKFII 7
           RGH F++
Sbjct: 108 RGHAFVL 114
>NP_000161
          Length = 1020

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   GHKFIISS 9
           GH+FI+ +
Sbjct: 860 GHEFILDT 867
>NP_001269158
          Length = 391

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 313 GHPMVISS 320
>NP_001269155
          Length = 511

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 433 GHPMVISS 440
>NP_001269156
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 391 GHPMVISS 398
>NP_803124
          Length = 270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 192 GHPMVISS 199
>NP_001269154
          Length = 511

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 433 GHPMVISS 440
>NP_001269157
          Length = 469

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 391 GHPMVISS 398
>NP_000480
          Length = 2492

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2109 RGRLFIIST 2117
>NP_612114
          Length = 2454

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2071 RGRLFIIST 2079
>NP_003027
          Length = 728

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   HKFIISS 9
           HKF++ S
Sbjct: 257 HKFVVHS 263
>NP_001191790
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_001191791
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_001191788
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_005639
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_001191792
          Length = 96

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 10 GHEFIV 15
>NP_001191789
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_001269480
          Length = 461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 2  GHKFIIS 8
          GHK++++
Sbjct: 76 GHKYVLA 82
>NP_001191787
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_001191793
          Length = 96

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 10 GHEFIV 15
>NP_001269479
          Length = 461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 2  GHKFIIS 8
          GHK++++
Sbjct: 76 GHKYVLA 82
>NP_001191786
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>NP_055777
          Length = 522

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 2   GHKFIIS 8
           GHK++++
Sbjct: 137 GHKYVLA 143
>NP_001129610
          Length = 1054

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 379 HKYIIS 384
>NP_001274150
          Length = 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 210 HKYIIS 215
>NP_001274148
          Length = 854

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 179 HKYIIS 184
>NP_001274147
          Length = 854

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 179 HKYIIS 184
>NP_004696
          Length = 761

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   RGHKFIISS 9
           RG  +I+SS
Sbjct: 326 RGQAYIVSS 334
>NP_036556
          Length = 1066

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 391 HKYIIS 396
>NP_852108
          Length = 565

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 2   GHKFIIS 8
           GHK++++
Sbjct: 180 GHKYVLA 186
>XP_006724730
          Length = 2399

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2016 RGRLFIIST 2024
>XP_005262214
          Length = 2424

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2041 RGRLFIIST 2049
>XP_005262213
          Length = 2437

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2054 RGRLFIIST 2062
>XP_006724729
          Length = 2453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2070 RGRLFIIST 2078
>XP_005262212
          Length = 2453

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2070 RGRLFIIST 2078
>XP_005262211
          Length = 2463

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2080 RGRLFIIST 2088
>XP_005262210
          Length = 2491

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    RGHKFIISS 9
            RG  FIIS+
Sbjct: 2108 RGRLFIIST 2116
>XP_006724143
          Length = 283

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   GHKFIISS 9
           GH  +ISS
Sbjct: 205 GHPMVISS 212
>XP_006723614
          Length = 461

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 2  GHKFIIS 8
          GHK++++
Sbjct: 76 GHKYVLA 82
>XP_006723613
          Length = 522

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/7 (42%), Positives = 7/7 (100%)

Query: 2   GHKFIIS 8
           GHK++++
Sbjct: 137 GHKYVLA 143
>XP_005251347
          Length = 112

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2  GHKFII 7
          GH+FI+
Sbjct: 26 GHEFIV 31
>XP_005273155
          Length = 714

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  HKFIIS 8
          HK+IIS
Sbjct: 39 HKYIIS 44
>XP_005273153
          Length = 885

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 210 HKYIIS 215
>XP_006711335
          Length = 945

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 270 HKYIIS 275
>XP_005273152
          Length = 1035

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HKFIIS 8
           HK+IIS
Sbjct: 360 HKYIIS 365
>XP_005244832
          Length = 730

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3   HKFIISS 9
           HKF++ S
Sbjct: 257 HKFVVHS 263
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.331    0.143    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 617,376
Number of extensions: 677
Number of successful extensions: 90
Number of sequences better than 10000.0: 90
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 90
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.2 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package