Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_079390 17 2528 XP_006719673 17 2528 XP_005269218 17 2528 XP_005269217 17 2528 XP_006719672 17 2528 XP_005269215 17 2528 NP_055448 17 4312 NP_997320 16 5631 XP_005253612 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_065759 16 7355 NP_001128243 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001108451 15 9605 NP_001108454 15 9605 NP_003713 15 9605 NP_001108450 15 9605 NP_001108452 15 9605 NP_001108453 15 9605 NP_001191121 15 9605 NP_001119713 15 9605 NP_001191117 15 9605 NP_001119712 15 9605 NP_001119714 15 9605 NP_005418 15 9605 NP_001191116 15 9605 NP_001191115 15 9605 NP_001191119 15 9605 NP_001013758 15 9605 NP_001191113 15 9605 NP_001191118 15 9605 NP_001191120 15 9605 NP_001191114 15 9605 XP_005247903 15 9605 XP_005247901 15 9605 XP_005247900 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 156 RVRAMAIYK 164>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 156 RVRAMAIYK 164>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 156 RVRAMAIYK 164>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 117 RVRAMAIYK 125>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 156 RVRAMAIYK 164>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 117 RVRAMAIYK 125>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 24 RVRAMAIYK 32>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 24 RVRAMAIYK 32>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 R RAMAIYK Sbjct: 24 RVRAMAIYK 32>NP_079390 Length = 2479 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 RF+ MAI+K Sbjct: 937 RFKEMAIFK 945>XP_006719673 Length = 1997 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 RF+ MAI+K Sbjct: 455 RFKEMAIFK 463>XP_005269218 Length = 2009 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 RF+ MAI+K Sbjct: 467 RFKEMAIFK 475>XP_005269217 Length = 2353 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 RF+ MAI+K Sbjct: 968 RFKEMAIFK 976>XP_006719672 Length = 2510 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 RF+ MAI+K Sbjct: 968 RFKEMAIFK 976>XP_005269215 Length = 2510 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFRAMAIYK 9 RF+ MAI+K Sbjct: 968 RFKEMAIFK 976>NP_055448 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RAMAIYK 9 RA+AIYK Sbjct: 631 RALAIYK 637>NP_997320 Length = 4471 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFRAMAIY 8 R+R MA+Y Sbjct: 1132 RYRTMAMY 1139>XP_005253612 Length = 4589 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFRAMAIY 8 R+R MA+Y Sbjct: 1250 RYRTMAMY 1257>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 9178 QFRAMAI 9184>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 9303 QFRAMAI 9309>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 16602 QFRAMAI 16608>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 15675 QFRAMAI 15681>NP_065759 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FRAMAIYK 9 F AMAI+K Sbjct: 208 FPAMAIFK 215>NP_001128243 Length = 1139 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FRAMAIYK 9 F AMAI+K Sbjct: 231 FPAMAIFK 238>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 4915 QFRAMAI 4921>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 6274 QFRAMAI 6280>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 16230 QFRAMAI 16236>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 17736 QFRAMAI 17742>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 18243 QFRAMAI 18249>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 RFRAMAI 7 +FRAMAI Sbjct: 9370 QFRAMAI 9376>NP_001108451 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 226 RAMPVYK 232>NP_001108454 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 132 RAMPVYK 138>NP_003713 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 226 RAMPVYK 232>NP_001108450 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 226 RAMPVYK 232>NP_001108452 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 132 RAMPVYK 138>NP_001108453 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 132 RAMPVYK 138>NP_001191121 Length = 565 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 105 RAMPVYK 111>NP_001119713 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 127 RAMPVYK 133>NP_001191117 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 176 RAMPVYK 182>NP_001119712 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 127 RAMPVYK 133>NP_001119714 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 127 RAMPVYK 133>NP_005418 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 176 RAMPVYK 182>NP_001191116 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 176 RAMPVYK 182>NP_001191115 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 176 RAMPVYK 182>NP_001191119 Length = 506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 127 RAMPVYK 133>NP_001013758 Length = 1035 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 1017 RAMQVYK 1023>NP_001191113 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 176 RAMPVYK 182>NP_001191118 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 127 RAMPVYK 133>NP_001191120 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 127 RAMPVYK 133>NP_001191114 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 176 RAMPVYK 182>XP_005247903 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 226 RAMPVYK 232>XP_005247901 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 209 RAMPVYK 215>XP_005247900 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RAMAIYK 9 RAM +YK Sbjct: 226 RAMPVYK 232Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.352 0.147 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 278,494 Number of extensions: 366 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |