Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 19 665 NP_001277143 19 665 NP_001077383 19 665 NP_001320 19 665 NP_073713 19 665 XP_005269629 19 665 XP_005269628 19 665 XP_005269627 19 665 XP_005269626 19 665 XP_006717706 19 665 XP_005269625 19 665 XP_005269624 19 665 XP_006717705 19 665 XP_005269622 19 665 XP_005269621 19 665 XP_006717704 19 665 XP_005269619 19 665 XP_005269618 19 665 NP_955452 18 1935 XP_006713543 18 1935 NP_065970 17 4312 XP_006712718 17 4312 XP_005246766 17 4312 XP_006712717 17 4312 NP_001155003 16 5631 NP_001155002 16 5631 NP_001155001 16 5631 NP_079120 16 5631 NP_001155004 16 5631 XP_006724923 16 5631 XP_006724922 16 5631 XP_006724921 16 5631 XP_006724502 16 5631 XP_006724501 16 5631 XP_006724500 16 5631 XP_005257750 16 5631 XP_005257747 16 5631 XP_006722157 16 5631 NP_006131 16 5631 NP_758448 16 5631 NP_060147 16 7355 NP_059509 16 7355 NP_001319 15 9605 NP_001012632 15 9605 NP_689899 15 9605 NP_001277060 15 9605 NP_001028733 15 9605 XP_006724100 15 9605 XP_005258073 15 9605 XP_005258072 15 9605 XP_006714631 15 9605 XP_006714630 15 9605 XP_005271975 15 9605 XP_005271974 15 9605 XP_005272320 15 9605 XP_005272319 15 9605 XP_005272318 15 9605>NP_001277144 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>NP_001277143 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>NP_001077383 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>NP_001320 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>NP_073713 Length = 985 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 759 RSLGVQRVY 767>XP_005269629 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269628 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269627 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269626 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_006717706 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269625 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269624 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_006717705 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269622 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269621 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_006717704 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269619 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>XP_005269618 Length = 445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 R LGVQRVY Sbjct: 219 RSLGVQRVY 227>NP_955452 Length = 2590 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FLGVQRVY 9 FLG++R+Y Sbjct: 2223 FLGMERIY 2230>XP_006713543 Length = 2591 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FLGVQRVY 9 FLG++R+Y Sbjct: 2224 FLGMERIY 2231>NP_065970 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGVQRVY 9 FLGVQR + Sbjct: 1522 FLGVQRKF 1529>XP_006712718 Length = 969 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGVQRVY 9 FLGVQR + Sbjct: 834 FLGVQRKF 841>XP_005246766 Length = 1656 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGVQRVY 9 FLGVQR + Sbjct: 1521 FLGVQRKF 1528>XP_006712717 Length = 1657 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FLGVQRVY 9 FLGVQR + Sbjct: 1522 FLGVQRKF 1529>NP_001155003 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 348 RFLRIQRLF 356>NP_001155002 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 382 RFLRIQRLF 390>NP_001155001 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 348 RFLRIQRLF 356>NP_079120 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGVQRV 8 FLG+QR+ Sbjct: 79 FLGLQRI 85>NP_001155004 Length = 267 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 215 RFLRIQRLF 223>XP_006724923 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 429 RFLRIQRLF 437>XP_006724922 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 421 RFLRIQRLF 429>XP_006724921 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 429 RFLRIQRLF 437>XP_006724502 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 429 RFLRIQRLF 437>XP_006724501 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 421 RFLRIQRLF 429>XP_006724500 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 429 RFLRIQRLF 437>XP_005257750 Length = 330 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGVQRV 8 FLG+QR+ Sbjct: 79 FLGLQRI 85>XP_005257747 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGVQRV 8 FLG+QR+ Sbjct: 79 FLGLQRI 85>XP_006722157 Length = 611 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FLGVQRV 8 FLG+QR+ Sbjct: 79 FLGLQRI 85>NP_006131 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 348 RFLRIQRLF 356>NP_758448 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RFL +QR++ Sbjct: 348 RFLRIQRLF 356>NP_060147 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 RF+G++ ++ Sbjct: 269 RFMGIENIH 277>NP_059509 Length = 655 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FLGVQRVY 9 FLG+ R+Y Sbjct: 336 FLGIIRLY 343>NP_001319 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 R LG+QRV Sbjct: 213 RALGLQRV 220>NP_001012632 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 R LG+QRV Sbjct: 202 RALGLQRV 209>NP_689899 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 + LGVQR+ Sbjct: 70 QLLGVQRI 77>NP_001277060 Length = 849 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 +FL +QR++ Sbjct: 751 KFLALQRIH 759>NP_001028733 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 +FL +QR++ Sbjct: 751 KFLALQRIH 759>XP_006724100 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LGVQRVY 9 LGV+++Y Sbjct: 299 LGVEKIY 305>XP_005258073 Length = 787 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 +FL +QR++ Sbjct: 534 KFLALQRIH 542>XP_005258072 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 RFLGVQRVY 9 +FL +QR++ Sbjct: 661 KFLALQRIH 669>XP_006714631 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 + LGVQR+ Sbjct: 70 QLLGVQRI 77>XP_006714630 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 + LGVQR+ Sbjct: 70 QLLGVQRI 77>XP_005271975 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 + LGVQR+ Sbjct: 70 QLLGVQRI 77>XP_005271974 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 + LGVQR+ Sbjct: 70 QLLGVQRI 77>XP_005272320 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 R LG+QRV Sbjct: 202 RALGLQRV 209>XP_005272319 Length = 430 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 R LG+QRV Sbjct: 202 RALGLQRV 209>XP_005272318 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFLGVQRV 8 R LG+QRV Sbjct: 213 RALGLQRV 220Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.160 0.490 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,759 Number of extensions: 657 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |