Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_872409 18 1935 XP_006718595 18 1935 NP_002200 17 3301 NP_001107852 17 3301 XP_006721107 17 3301 XP_005255370 17 3301 NP_653295 17 4312 XP_005258622 17 4312 NP_001114 16 5631 NP_006712 16 5631 NP_001189378 16 5631 XP_005269595 16 5631 NP_001186162 16 7355 NP_001129490 16 7355 NP_001278092 16 7355 NP_000111 16 7355 XP_006716983 16 7355 NP_689549 15 9605 NP_057314 15 9605 NP_149079 15 9605 NP_079076 15 9605 NP_997698 15 9605 NP_001257697 15 9605 NP_665917 15 9605 NP_653286 15 9605 NP_001096078 15 9605 NP_005188 15 9605 NP_001597 15 9605 NP_001139475 15 9605 XP_006723099 15 9605 XP_005256244 15 9605 XP_006721357 15 9605 XP_006721356 15 9605 XP_006717059 15 9605 XP_005248043 15 9605 XP_006713958 15 9605 XP_006713813 15 9605 XP_006713812 15 9605 XP_005247842 15 9605 XP_005247840 15 9605 XP_005247178 15 9605 XP_006711058 15 9605 XP_006711057 15 9605 NP_065824 15 9605 NP_001153685 15 9605 NP_112583 15 9605 NP_001078940 15 9605 NP_001106832 15 9605>NP_872409 Length = 389 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RFFKRNLMK 9 RFFK+N+++ Sbjct: 210 RFFKQNILQ 218>XP_006718595 Length = 505 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 RFFKRNLMK 9 RFFK+N+++ Sbjct: 210 RFFKQNILQ 218>NP_002200 Length = 1170 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFKRNL 7 FFKRNL Sbjct: 1116 FFKRNL 1121>NP_001107852 Length = 1086 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFKRNL 7 FFKRNL Sbjct: 1032 FFKRNL 1037>XP_006721107 Length = 1087 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFKRNL 7 FFKRNL Sbjct: 1033 FFKRNL 1038>XP_005255370 Length = 1169 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FFKRNL 7 FFKRNL Sbjct: 1115 FFKRNL 1120>NP_653295 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFFKRNLM 8 R FK+NLM Sbjct: 197 RSFKKNLM 204>XP_005258622 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFFKRNLM 8 R FK+NLM Sbjct: 253 RSFKKNLM 260>NP_001114 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFKRNLMK 9 +F+K +LMK Sbjct: 204 QFYKESLMK 212>NP_006712 Length = 362 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFKRNLMK 9 +F+K +LMK Sbjct: 221 QFYKESLMK 229>NP_001189378 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFKRNLMK 9 +F+K +LMK Sbjct: 186 QFYKESLMK 194>XP_005269595 Length = 294 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 RFFKRNLMK 9 +F+K +LMK Sbjct: 221 QFYKESLMK 229>NP_001186162 Length = 120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FFKRNL 7 F+KRNL Sbjct: 97 FYKRNL 102>NP_001129490 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RFFKRNL 7 RF+K NL Sbjct: 372 RFYKENL 378>NP_001278092 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RFFKRNL 7 RF+K NL Sbjct: 372 RFYKENL 378>NP_000111 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RFFKRNL 7 RF+K NL Sbjct: 372 RFYKENL 378>XP_006716983 Length = 173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FFKRNL 7 F+KRNL Sbjct: 150 FYKRNL 155>NP_689549 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FFKRNLM 8 FFK NL+ Sbjct: 1051 FFKMNLL 1057>NP_057314 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F KRNL K Sbjct: 478 FLKRNLDK 485>NP_149079 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RFFKRNLM 8 +FF +N+M Sbjct: 615 KFFNQNIM 622>NP_079076 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 165 FLKNNLLK 172>NP_997698 Length = 2466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 RFFKRN 6 RFF RN Sbjct: 2328 RFFNRN 2333>NP_001257697 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RFFKRNLM 8 +FF +N+M Sbjct: 520 KFFNQNIM 527>NP_665917 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 165 FLKNNLLK 172>NP_653286 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FFKRN 6 FFKRN Sbjct: 248 FFKRN 252>NP_001096078 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RFFKRNLMK 9 RF RN+ K Sbjct: 1847 RFISRNVFK 1855>NP_005188 Length = 468 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FFKRN 6 FFKRN Sbjct: 239 FFKRN 243>NP_001597 Length = 2436 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 RFFKRN 6 RFF RN Sbjct: 2298 RFFNRN 2303>NP_001139475 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 165 FLKNNLLK 172>XP_006723099 Length = 619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FFKRN 6 FFKRN Sbjct: 248 FFKRN 252>XP_005256244 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRNLMK 9 KRN+MK Sbjct: 343 KRNIMK 348>XP_006721357 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRNLMK 9 KRN+MK Sbjct: 343 KRNIMK 348>XP_006721356 Length = 1017 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRNLMK 9 KRN+MK Sbjct: 343 KRNIMK 348>XP_006717059 Length = 2435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 RFFKRN 6 RFF RN Sbjct: 2297 RFFNRN 2302>XP_005248043 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FFKRNLM 8 FF RNL+ Sbjct: 238 FFARNLL 244>XP_006713958 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FFKRNLM 8 FF RNL+ Sbjct: 238 FFARNLL 244>XP_006713813 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 165 FLKNNLLK 172>XP_006713812 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 59 FLKNNLLK 66>XP_005247842 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 165 FLKNNLLK 172>XP_005247840 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FFKRNLMK 9 F K NL+K Sbjct: 165 FLKNNLLK 172>XP_005247178 Length = 2263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 RFFKRNLMK 9 RF RN+ K Sbjct: 1847 RFISRNVFK 1855>XP_006711058 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RFFKRNLM 8 +FF +N+M Sbjct: 309 KFFNQNIM 316>XP_006711057 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 RFFKRNLM 8 +FF +N+M Sbjct: 616 KFFNQNIM 623>NP_065824 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FFKRNLM 8 FF RNL+ Sbjct: 238 FFARNLL 244>NP_001153685 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRNLMK 9 KRN+MK Sbjct: 198 KRNIMK 203>NP_112583 Length = 1007 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KRNLMK 9 KRN+MK Sbjct: 343 KRNIMK 348>NP_001078940 Length = 490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 FFKRN 6 FFKRN Sbjct: 239 FFKRN 243>NP_001106832 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FFKRNLM 8 FF RNL+ Sbjct: 238 FFARNLL 244Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.351 0.153 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,018 Number of extensions: 787 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |