Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 390 NP_001091680 20 390 NP_001091679 20 390 XP_006713048 20 390 XP_006713047 20 390 XP_006713046 20 390 XP_005264943 20 390 NP_116164 17 2528 XP_006724406 17 2528 XP_006724405 17 2528 NP_036424 17 3301 NP_001245257 17 3301 XP_006722776 17 3301 NP_710142 17 4312 NP_001269973 17 4312 NP_055805 17 4312 NP_001269972 17 4312 NP_919277 17 4312 XP_005267555 17 4312 XP_006720166 17 4312 XP_005267550 17 4312 XP_005267549 17 4312 XP_005267548 17 4312 XP_006720165 17 4312 XP_006720164 17 4312 XP_006720163 17 4312 XP_006720162 17 4312 XP_006720161 17 4312 XP_006714837 17 4312 NP_001815 16 7355 NP_001091954 16 7355 NP_003750 16 7355 NP_001128214 16 7355 NP_061862 16 7355 XP_005258554 16 7355 XP_005268525 16 7355 XP_005268524 16 7355 XP_006714850 16 7355 XP_005268523 16 7355 XP_006714462 16 7355 XP_006714461 16 7355 XP_005265761 16 7355 NP_004658 15 9605 NP_602296 15 9605 NP_065076 15 9605 NP_001611 15 9605 NP_001138523 15 9605 NP_689473 15 9605 XP_006723662 15 9605 XP_005260825 15 9605 XP_006723661 15 9605 XP_006720790 15 9605 XP_005268334 15 9605 XP_005268333 15 9605 XP_006720789 15 9605 XP_005253784 15 9605 XP_005253782 15 9605 XP_006719060 15 9605 XP_006719059 15 9605 XP_006719058 15 9605 XP_005253778 15 9605 XP_005253777 15 9605 XP_006718751 15 9605 XP_006718750 15 9605 XP_005274303 15 9605 XP_006718749 15 9605 XP_005274302 15 9605 XP_005274301 15 9605 XP_005274300 15 9605 XP_005274299 15 9605 XP_005274298 15 9605 XP_005274297 15 9605 XP_006710312 15 9605>NP_001895 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 274 RLAGGLQKM 282>NP_001091680 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 274 RLAGGLQKM 282>NP_001091679 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 274 RLAGGLQKM 282>XP_006713048 Length = 720 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 274 RLAGGLQKM 282>XP_006713047 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 267 RLAGGLQKM 275>XP_006713046 Length = 774 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 267 RLAGGLQKM 275>XP_005264943 Length = 781 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 R AGGLQKM Sbjct: 274 RLAGGLQKM 282>NP_116164 Length = 634 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FAGGLQKM 9 FAGGL++M Sbjct: 79 FAGGLKEM 86>XP_006724406 Length = 666 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FAGGLQKM 9 FAGGL++M Sbjct: 111 FAGGLKEM 118>XP_006724405 Length = 682 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FAGGLQKM 9 FAGGL++M Sbjct: 127 FAGGLKEM 134>NP_036424 Length = 1136 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 RFA GL+K+ Sbjct: 125 RFAEGLEKL 133>NP_001245257 Length = 1152 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 RFA GL+K+ Sbjct: 141 RFAEGLEKL 149>XP_006722776 Length = 1164 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RFAGGLQKM 9 RFA GL+K+ Sbjct: 125 RFAEGLEKL 133>NP_710142 Length = 899 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 RFAGGL Sbjct: 531 RFAGGL 536>NP_001269973 Length = 2083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1901 FMGGLQK 1907>NP_055805 Length = 2036 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1854 FMGGLQK 1860>NP_001269972 Length = 2049 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1867 FMGGLQK 1873>NP_919277 Length = 2083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1854 FMGGLQK 1860>XP_005267555 Length = 1325 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1095 FMGGLQK 1101>XP_006720166 Length = 2083 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1901 FMGGLQK 1907>XP_005267550 Length = 2084 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1854 FMGGLQK 1860>XP_005267549 Length = 2130 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1901 FMGGLQK 1907>XP_005267548 Length = 2131 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 1901 FMGGLQK 1907>XP_006720165 Length = 2542 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 2360 FMGGLQK 2366>XP_006720164 Length = 2542 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 2360 FMGGLQK 2366>XP_006720163 Length = 2543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 2313 FMGGLQK 2319>XP_006720162 Length = 2589 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 2360 FMGGLQK 2366>XP_006720161 Length = 2590 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQK Sbjct: 2360 FMGGLQK 2366>XP_006714837 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RFAGGLQK 8 R+AGGL K Sbjct: 568 RYAGGLGK 575>NP_001815 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 RF GLQK+ Sbjct: 252 RFCVGLQKI 260>NP_001091954 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RFAGGLQK 8 RF GGL K Sbjct: 441 RFCGGLIK 448>NP_003750 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RFAGGLQK 8 RF GGL K Sbjct: 397 RFCGGLIK 404>NP_001128214 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RFAGGLQK 8 RF GGL K Sbjct: 441 RFCGGLIK 448>NP_061862 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGLQKM 9 GG+QKM Sbjct: 726 GGIQKM 731>XP_005258554 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 RF GLQK+ Sbjct: 326 RFCVGLQKI 334>XP_005268525 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGLQKM 9 GG+QKM Sbjct: 671 GGIQKM 676>XP_005268524 Length = 1006 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGLQKM 9 GG+QKM Sbjct: 672 GGIQKM 677>XP_006714850 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGLQKM 9 GG+QKM Sbjct: 715 GGIQKM 720>XP_005268523 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GGLQKM 9 GG+QKM Sbjct: 727 GGIQKM 732>XP_006714462 Length = 1084 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RFAGGLQK 8 RF GGL K Sbjct: 446 RFCGGLIK 453>XP_006714461 Length = 1099 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RFAGGLQK 8 RF GGL K Sbjct: 461 RFCGGLIK 468>XP_005265761 Length = 1110 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 RFAGGLQK 8 RF GGL K Sbjct: 472 RFCGGLIK 479>NP_004658 Length = 4834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 1342 FSGGLQ 1347>NP_602296 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>NP_065076 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQ+ Sbjct: 1693 FMGGLQR 1699>NP_001611 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5612 KFAGGL 5617>NP_001138523 Length = 219 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 160 FSGGLQ 165>NP_689473 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FAGGLQKM 9 F GGL+K+ Sbjct: 135 FEGGLRKV 142>XP_006723662 Length = 1920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQ+ Sbjct: 1740 FMGGLQR 1746>XP_005260825 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQ+ Sbjct: 1693 FMGGLQR 1699>XP_006723661 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FAGGLQK 8 F GGLQ+ Sbjct: 1740 FMGGLQR 1746>XP_006720790 Length = 4748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 1256 FSGGLQ 1261>XP_005268334 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 1304 FSGGLQ 1309>XP_005268333 Length = 4796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 1304 FSGGLQ 1309>XP_006720789 Length = 4829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 1337 FSGGLQ 1342>XP_005253784 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_005253782 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_006719060 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_006719059 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_006719058 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_005253778 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_005253777 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RFAGGLQKM 9 R AGG QK+ Sbjct: 55 RMAGGGQKV 63>XP_006718751 Length = 3489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 3211 KFAGGL 3216>XP_006718750 Length = 4001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 3723 KFAGGL 3728>XP_005274303 Length = 4506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 4228 KFAGGL 4233>XP_006718749 Length = 4596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 4318 KFAGGL 4323>XP_005274302 Length = 5438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5160 KFAGGL 5165>XP_005274301 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5484 KFAGGL 5489>XP_005274300 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5484 KFAGGL 5489>XP_005274299 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5484 KFAGGL 5489>XP_005274298 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5612 KFAGGL 5617>XP_005274297 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 RFAGGL 6 +FAGGL Sbjct: 5612 KFAGGL 5617>XP_006710312 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FAGGLQ 7 F+GGLQ Sbjct: 10 FSGGLQ 15Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.146 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 627,087 Number of extensions: 836 Number of successful extensions: 73 Number of sequences better than 10000.0: 73 Number of HSP's gapped: 73 Number of HSP's successfully gapped: 73 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |