Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 17 3301 XP_005266703 17 3301 NP_001879 16 5631 NP_001014444 16 5631 NP_060362 16 7355 XP_005246736 16 7355 XP_005246735 16 7355 XP_005246734 16 7355 XP_005246733 16 7355 NP_001245261 15 9605 NP_000146 15 9605 NP_001275707 15 9605 NP_004415 15 9605 XP_006720921 15 9605 XP_006720920 15 9605 XP_005255213 15 9605 XP_005255212 15 9605 XP_005247366 15 9605 XP_006713639 15 9605 XP_005247365 15 9605 XP_005247364 15 9605 XP_005247363 15 9605 XP_006713637 15 9605 XP_006713636 15 9605 XP_005247362 15 9605 XP_005247360 15 9605 XP_006713635 15 9605 XP_006713634 15 9605 XP_005247359 15 9605 XP_005247358 15 9605 XP_006713633 15 9605 XP_005247357 15 9605 XP_006713632 15 9605 XP_005247356 15 9605 XP_005247355 15 9605 XP_005247354 15 9605 XP_005247353 15 9605 XP_005247352 15 9605 XP_005247351 15 9605 XP_005247350 15 9605 XP_005247348 15 9605 XP_005247347 15 9605 XP_005247346 15 9605 XP_005247345 15 9605 XP_005247344 15 9605 XP_005247343 15 9605 XP_005247342 15 9605 XP_005247341 15 9605 XP_005247340 15 9605 XP_005247339 15 9605 XP_006713631 15 9605 XP_005247338 15 9605>NP_443179 Length = 2170 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTIATE Sbjct: 1010 TVTIATE 1016>XP_005266703 Length = 1501 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTIATE Sbjct: 341 TVTIATE 347>NP_001879 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVT+ATE Sbjct: 203 TVTLATE 209>NP_001014444 Length = 272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVT+ATE Sbjct: 161 TVTLATE 167>NP_060362 Length = 930 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTI+TE Sbjct: 304 TVTISTE 310>XP_005246736 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTI+TE Sbjct: 346 TVTISTE 352>XP_005246735 Length = 976 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTI+TE Sbjct: 346 TVTISTE 352>XP_005246734 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTI+TE Sbjct: 304 TVTISTE 310>XP_005246733 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TVTIATE 9 TVTI+TE Sbjct: 346 TVTISTE 352>NP_001245261 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RETVTIA 7 RET TIA Sbjct: 264 RETATIA 270>NP_000146 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RETVTIA 7 RET TIA Sbjct: 373 RETATIA 379>NP_001275707 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETVTIAT 8 +T+TIAT Sbjct: 532 DTITIAT 538>NP_004415 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETVTIAT 8 +T+TIAT Sbjct: 709 DTITIAT 715>XP_006720921 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETVTIAT 8 +T+TIAT Sbjct: 708 DTITIAT 714>XP_006720920 Length = 785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETVTIAT 8 +T+TIAT Sbjct: 710 DTITIAT 716>XP_005255213 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETVTIAT 8 +T+TIAT Sbjct: 761 DTITIAT 767>XP_005255212 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ETVTIAT 8 +T+TIAT Sbjct: 762 DTITIAT 768>XP_005247366 Length = 1495 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 836 ESVTLSTE 843>XP_006713639 Length = 1579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 920 ESVTLSTE 927>XP_005247365 Length = 1607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 948 ESVTLSTE 955>XP_005247364 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 978 ESVTLSTE 985>XP_005247363 Length = 1657 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 998 ESVTLSTE 1005>XP_006713637 Length = 1659 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1000 ESVTLSTE 1007>XP_006713636 Length = 1673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1014 ESVTLSTE 1021>XP_005247362 Length = 1678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1019 ESVTLSTE 1026>XP_005247360 Length = 1706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1047 ESVTLSTE 1054>XP_006713635 Length = 1719 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1060 ESVTLSTE 1067>XP_006713634 Length = 1721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1062 ESVTLSTE 1069>XP_005247359 Length = 1725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1066 ESVTLSTE 1073>XP_005247358 Length = 1726 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_006713633 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1072 ESVTLSTE 1079>XP_005247357 Length = 1735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1076 ESVTLSTE 1083>XP_006713632 Length = 1742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_005247356 Length = 1744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1085 ESVTLSTE 1092>XP_005247355 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1086 ESVTLSTE 1093>XP_005247354 Length = 1745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1086 ESVTLSTE 1093>XP_005247353 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1087 ESVTLSTE 1094>XP_005247352 Length = 1747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1088 ESVTLSTE 1095>XP_005247351 Length = 1754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1095 ESVTLSTE 1102>XP_005247350 Length = 1757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_005247348 Length = 1767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_005247347 Length = 1768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_005247346 Length = 1768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1109 ESVTLSTE 1116>XP_005247345 Length = 1769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1110 ESVTLSTE 1117>XP_005247344 Length = 1771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_005247343 Length = 1771 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1112 ESVTLSTE 1119>XP_005247342 Length = 1773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1114 ESVTLSTE 1121>XP_005247341 Length = 1774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1115 ESVTLSTE 1122>XP_005247340 Length = 1777 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141>XP_005247339 Length = 1779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1120 ESVTLSTE 1127>XP_006713631 Length = 1789 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1130 ESVTLSTE 1137>XP_005247338 Length = 1793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ETVTIATE 9 E+VT++TE Sbjct: 1134 ESVTLSTE 1141Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.114 0.264 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 314,736 Number of extensions: 400 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |