Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005119                                                              18    1935
XP_006724131                                                           18    1935
NP_000876                                                              17    2528
NP_060009                                                              17    3301
XP_006721125                                                           17    3301
NP_001158238                                                           17    4312
NP_115997                                                              17    4312
NP_008816                                                              17    4312
XP_006724403                                                           17    4312
XP_005261845                                                           17    4312
XP_005261844                                                           17    4312
XP_005261843                                                           17    4312
XP_005256014                                                           17    4312
NP_002099                                                              16    5631
NP_001245263                                                           16    5631
NP_002363                                                              16    5631
XP_005268878                                                           16    5631
XP_006714679                                                           16    5631
NP_055141                                                              16    7355
NP_115582                                                              16    7355
NP_004934                                                              16    7355
XP_006721363                                                           16    7355
XP_005256258                                                           16    7355
XP_005256257                                                           16    7355
XP_005256256                                                           16    7355
XP_005256255                                                           16    7355
XP_006721362                                                           16    7355
XP_006721361                                                           16    7355
XP_005256254                                                           16    7355
XP_005256253                                                           16    7355
XP_005256252                                                           16    7355
XP_005256251                                                           16    7355
XP_006721360                                                           16    7355
XP_005256250                                                           16    7355
XP_005254325                                                           16    7355
XP_006720513                                                           16    7355
XP_006720512                                                           16    7355
NP_001340                                                              15    9605
NP_005480                                                              15    9605
NP_001239263                                                           15    9605
NP_001136005                                                           15    9605
NP_733745                                                              15    9605
NP_001136006                                                           15    9605
NP_001490                                                              15    9605
NP_001003722                                                           15    9605
NP_055073                                                              15    9605
NP_006112                                                              15    9605
XP_006723744                                                           15    9605
XP_005260304                                                           15    9605
XP_006717124                                                           15    9605
XP_006717123                                                           15    9605
XP_005251982                                                           15    9605
XP_006717122                                                           15    9605
XP_006717121                                                           15    9605
XP_005251694                                                           15    9605
XP_005248188                                                           15    9605
>NP_005119
          Length = 2298

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2    ESLVNLGE 9
            ESL+NLG+
Sbjct: 1421 ESLINLGQ 1428
>XP_006724131
          Length = 2298

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2    ESLVNLGE 9
            ESL+NLG+
Sbjct: 1421 ESLINLGQ 1428
>NP_000876
          Length = 1032

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   ESLVNLGE 9
           ES+VNLG+
Sbjct: 370 ESIVNLGD 377
>NP_060009
          Length = 4116

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            R SL+NLG
Sbjct: 3891 RRSLINLG 3898
>XP_006721125
          Length = 4070

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            R SL+NLG
Sbjct: 3845 RRSLINLG 3852
>NP_001158238
          Length = 2789

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  ESLVNLGE 9
          E L+NLGE
Sbjct: 11 EELMNLGE 18
>NP_115997
          Length = 2567

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RESLVNLGE 9
            R+SL+ +GE
Sbjct: 1997 RDSLIKMGE 2005
>NP_008816
          Length = 3703

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ESLVNLGE 9
           E L+NLGE
Sbjct: 925 EELMNLGE 932
>XP_006724403
          Length = 2449

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RESLVNLGE 9
            R+SL+ +GE
Sbjct: 1879 RDSLIKMGE 1887
>XP_005261845
          Length = 2568

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RESLVNLGE 9
            R+SL+ +GE
Sbjct: 1998 RDSLIKMGE 2006
>XP_005261844
          Length = 2568

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RESLVNLGE 9
            R+SL+ +GE
Sbjct: 1998 RDSLIKMGE 2006
>XP_005261843
          Length = 2568

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    RESLVNLGE 9
            R+SL+ +GE
Sbjct: 1998 RDSLIKMGE 2006
>XP_005256014
          Length = 3702

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ESLVNLGE 9
           E L+NLGE
Sbjct: 925 EELMNLGE 932
>NP_002099
          Length = 657

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ESLVNLGE 9
           E LVNLG+
Sbjct: 124 EDLVNLGK 131
>NP_001245263
          Length = 591

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ESLVNLGE 9
           E LVNLG+
Sbjct: 124 EDLVNLGK 131
>NP_002363
          Length = 1144

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  RESLVNLGE 9
          R+S++NL E
Sbjct: 73 RDSVINLSE 81
>XP_005268878
          Length = 556

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   ESLVNLGE 9
           E LVNLG+
Sbjct: 124 EDLVNLGK 131
>XP_006714679
          Length = 662

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  RESLVNLGE 9
          R+S++NL E
Sbjct: 73 RDSVINLSE 81
>NP_055141
          Length = 370

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RESLVNL 7
           RES+VNL
Sbjct: 297 RESVVNL 303
>NP_115582
          Length = 1866

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>NP_004934
          Length = 674

 Score = 15.8 bits (29), Expect =  7355
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   RESLVNLGE 9
           R SLV LGE
Sbjct: 95  RLSLVRLGE 103
>XP_006721363
          Length = 1385

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>XP_005256258
          Length = 1397

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1271 REASVNLG 1278
>XP_005256257
          Length = 1405

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>XP_005256256
          Length = 1427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1301 REASVNLG 1308
>XP_005256255
          Length = 1809

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1245 REASVNLG 1252
>XP_006721362
          Length = 1810

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>XP_006721361
          Length = 1836

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1272 REASVNLG 1279
>XP_005256254
          Length = 1837

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1273 REASVNLG 1280
>XP_005256253
          Length = 1838

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1274 REASVNLG 1281
>XP_005256252
          Length = 1865

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1301 REASVNLG 1308
>XP_005256251
          Length = 1866

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>XP_006721360
          Length = 1866

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>XP_005256250
          Length = 1866

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    RESLVNLG 8
            RE+ VNLG
Sbjct: 1302 REASVNLG 1309
>XP_005254325
          Length = 373

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RESLVNL 7
           RES+VNL
Sbjct: 300 RESVVNL 306
>XP_006720513
          Length = 375

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RESLVNL 7
           RES+VNL
Sbjct: 300 RESVVNL 306
>XP_006720512
          Length = 392

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   RESLVNL 7
           RES+VNL
Sbjct: 300 RESVVNL 306
>NP_001340
          Length = 501

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RESLVNLG 8
           RE+L+N G
Sbjct: 207 RETLINKG 214
>NP_005480
          Length = 703

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  RESLVNLGE 9
          R+SL +LG+
Sbjct: 86 RDSLTSLGD 94
>NP_001239263
          Length = 792

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+SL +LG+
Sbjct: 175 RDSLTSLGD 183
>NP_001136005
          Length = 702

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  RESLVNLGE 9
          R+SL +LG+
Sbjct: 85 RDSLTSLGD 93
>NP_733745
          Length = 860

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+SL +LG+
Sbjct: 243 RDSLTSLGD 251
>NP_001136006
          Length = 700

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  RESLVNLGE 9
          R+SL +LG+
Sbjct: 83 RDSLTSLGD 91
>NP_001490
          Length = 659

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+ L+NLG+
Sbjct: 319 RDLLMNLGQ 327
>NP_001003722
          Length = 698

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+ L+NLG+
Sbjct: 319 RDLLMNLGQ 327
>NP_055073
          Length = 1530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RESLVNLG 8
           +ESL+N G
Sbjct: 825 KESLINSG 832
>NP_006112
          Length = 644

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3  SLVNLG 8
          SLVNLG
Sbjct: 66 SLVNLG 71
>XP_006723744
          Length = 847

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RESLVNLG 8
           +ESL+N G
Sbjct: 825 KESLINSG 832
>XP_005260304
          Length = 1530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   RESLVNLG 8
           +ESL+N G
Sbjct: 825 KESLINSG 832
>XP_006717124
          Length = 459

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  RESLVNLGE 9
          R+ L+NLG+
Sbjct: 69 RDLLMNLGQ 77
>XP_006717123
          Length = 701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+ L+NLG+
Sbjct: 322 RDLLMNLGQ 330
>XP_005251982
          Length = 709

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+ L+NLG+
Sbjct: 319 RDLLMNLGQ 327
>XP_006717122
          Length = 710

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+ L+NLG+
Sbjct: 322 RDLLMNLGQ 330
>XP_006717121
          Length = 712

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+ L+NLG+
Sbjct: 322 RDLLMNLGQ 330
>XP_005251694
          Length = 822

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   RESLVNLGE 9
           R+SL +LG+
Sbjct: 205 RDSLTSLGD 213
>XP_005248188
          Length = 802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  RESLVNLG 8
          +ESL NLG
Sbjct: 6  KESLGNLG 13
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.305    0.132    0.328 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 415,045
Number of extensions: 826
Number of successful extensions: 56
Number of sequences better than 10000.0: 56
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 56
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.2 bits)
S2: 28 (15.4 bits)

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