Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001189394 18 1935 NP_001189393 18 1935 NP_006615 18 1935 NP_001189395 18 1935 NP_001189396 18 1935 NP_997644 18 1935 NP_001189397 18 1935 XP_005252420 18 1935 XP_006717439 18 1935 XP_005252419 18 1935 XP_005252418 18 1935 XP_005252417 18 1935 XP_005252416 18 1935 NP_008949 17 3301 XP_006717006 17 3301 XP_006717005 17 3301 XP_006717004 17 3301 XP_006717003 17 3301 XP_005251736 17 3301 NP_065145 17 4312 NP_001269701 16 5631 NP_061887 16 5631 NP_001269703 16 5631 NP_001269706 16 5631 NP_001269708 16 5631 NP_001269705 16 5631 NP_001131076 16 5631 NP_001191 16 7355 NP_001107 16 7355 NP_002206 16 7355 NP_002363 16 7355 NP_061027 16 7355 XP_005255136 16 7355 NP_079236 15 9605 NP_705902 15 9605 NP_705904 15 9605 NP_056364 15 9605 NP_065904 15 9605 XP_006723694 15 9605 XP_005260892 15 9605 XP_005260893 15 9605 XP_005267570 15 9605 XP_006720171 15 9605 XP_005267569 15 9605 XP_005267568 15 9605 XP_006720170 15 9605 XP_006720169 15 9605 XP_005253507 15 9605>NP_001189394 Length = 517 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 423 EKRQAVN 429>NP_001189393 Length = 548 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 454 EKRQAVN 460>NP_006615 Length = 602 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 508 EKRQAVN 514>NP_001189395 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 453 EKRQAVN 459>NP_001189396 Length = 514 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 454 EKRQAVN 460>NP_997644 Length = 567 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 507 EKRQAVN 513>NP_001189397 Length = 568 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 508 EKRQAVN 514>XP_005252420 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 453 EKRQAVN 459>XP_006717439 Length = 548 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 454 EKRQAVN 460>XP_005252419 Length = 548 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 454 EKRQAVN 460>XP_005252418 Length = 548 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 454 EKRQAVN 460>XP_005252417 Length = 601 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 507 EKRQAVN 513>XP_005252416 Length = 602 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAVN Sbjct: 508 EKRQAVN 514>NP_008949 Length = 2325 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AVN Sbjct: 1860 QEKREAVN 1867>XP_006717006 Length = 1760 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AVN Sbjct: 1280 QEKREAVN 1287>XP_006717005 Length = 1788 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AVN Sbjct: 1308 QEKREAVN 1315>XP_006717004 Length = 2240 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AVN Sbjct: 1860 QEKREAVN 1867>XP_006717003 Length = 2278 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AVN Sbjct: 1860 QEKREAVN 1867>XP_005251736 Length = 2325 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AVN Sbjct: 1860 QEKREAVN 1867>NP_065145 Length = 199 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 R+K QAVN Sbjct: 57 RQKNQAVN 64>NP_001269701 Length = 1173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 254 REEHSAVNM 262>NP_061887 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 216 REEHSAVNM 224>NP_001269703 Length = 952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 216 REEHSAVNM 224>NP_001269706 Length = 996 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 77 REEHSAVNM 85>NP_001269708 Length = 996 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 77 REEHSAVNM 85>NP_001269705 Length = 924 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 5 REEHSAVNM 13>NP_001131076 Length = 1079 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRQAVNM 9 RE+ AVNM Sbjct: 160 REEHSAVNM 168>NP_001191 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 REKRQA 6 REKRQA Sbjct: 279 REKRQA 284>NP_001107 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRQAVNM 9 +EK++ VNM Sbjct: 478 QEKKEMVNM 486>NP_002206 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EKRQAVN 8 EKRQAV+ Sbjct: 39 EKRQAVD 45>NP_002363 Length = 1144 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 EKRQAVN 8 EKR AVN Sbjct: 985 EKRSAVN 991>NP_061027 Length = 4599 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 REKRQA 6 REKRQA Sbjct: 3954 REKRQA 3959>XP_005255136 Length = 1372 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRQAVNM 9 +EK++ VNM Sbjct: 478 QEKKEMVNM 486>NP_079236 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AV+ Sbjct: 187 KEKREAVS 194>NP_705902 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AV+ Sbjct: 478 KEKREAVS 485>NP_705904 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AV+ Sbjct: 187 KEKREAVS 194>NP_056364 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1153 REKFQALN 1160>NP_065904 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EKRQAVNM 9 EKR+++N+ Sbjct: 366 EKRRSINL 373>XP_006723694 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AV+ Sbjct: 187 KEKREAVS 194>XP_005260892 Length = 365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AV+ Sbjct: 273 KEKREAVS 280>XP_005260893 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRQAVN 8 +EKR+AV+ Sbjct: 328 KEKREAVS 335>XP_005267570 Length = 1219 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1209 REKFQALN 1216>XP_006720171 Length = 1240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1230 REKFQALN 1237>XP_005267569 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1330 REKFQALN 1337>XP_005267568 Length = 1340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1330 REKFQALN 1337>XP_006720170 Length = 1354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1344 REKFQALN 1351>XP_006720169 Length = 1361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRQAVN 8 REK QA+N Sbjct: 1351 REKFQALN 1358>XP_005253507 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 EKRQAVNM 9 EKR+++N+ Sbjct: 366 EKRRSINL 373Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.120 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 472,871 Number of extensions: 623 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |