Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_000673 17 3301 NP_000672 17 3301 NP_000674 17 3301 NP_006853 17 4312 NP_001077434 17 4312 NP_001077433 17 4312 NP_001077432 17 4312 XP_005244911 17 4312 XP_005244910 17 4312 NP_115977 16 5631 NP_477520 16 5631 NP_001139266 16 5631 NP_775817 16 5631 NP_001129477 16 5631 NP_001129478 16 5631 NP_000810 16 5631 XP_006724053 16 5631 XP_006724052 16 5631 XP_005260998 16 5631 XP_006724051 16 5631 XP_005264997 16 5631 XP_005264996 16 5631 XP_005264995 16 5631 XP_006713079 16 5631 XP_006713078 16 5631 NP_780294 16 5631 NP_004689 16 7355 NP_068711 16 7355 NP_000804 16 7355 NP_001005853 16 7355 XP_005247061 16 7355 NP_775486 16 7355 NP_001191355 15 9605 NP_001009899 15 9605 NP_036385 15 9605 NP_001139406 15 9605 NP_001139405 15 9605 NP_777577 15 9605 NP_001230208 15 9605 NP_001139373 15 9605 NP_060297 15 9605 NP_001093122 15 9605 NP_001120686 15 9605 NP_002305 15 9605 XP_006721229 15 9605 XP_005256350 15 9605 XP_005247266 15 9605 XP_005247265 15 9605 NP_001139669 15 9605 NP_653176 15 9605>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 REKRLSF V Sbjct: 888 REKRLSFAV 896>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 REKRLSF V Sbjct: 888 REKRLSFAV 896>NP_000673 Length = 450 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 REKR +FV+ Sbjct: 365 REKRFTFVL 373>NP_000672 Length = 465 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 REKR +FV+ Sbjct: 383 REKRFTFVL 391>NP_000674 Length = 462 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 REKR +FV+ Sbjct: 376 REKRFTFVL 384>NP_006853 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+RL+FV Sbjct: 41 REERLTFV 48>NP_001077434 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+RL+FV Sbjct: 41 REERLTFV 48>NP_001077433 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+RL+FV Sbjct: 41 REERLTFV 48>NP_001077432 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+RL+FV Sbjct: 41 REERLTFV 48>XP_005244911 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+RL+FV Sbjct: 41 REERLTFV 48>XP_005244910 Length = 561 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+RL+FV Sbjct: 41 REERLTFV 48>NP_115977 Length = 353 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 +EK+LSF+ Sbjct: 235 QEKKLSFI 242>NP_477520 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKRLSFVV 9 E RLSF+V Sbjct: 77 EMRLSFIV 84>NP_001139266 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EKRLSFVV 9 E RLSF+V Sbjct: 77 EMRLSFIV 84>NP_775817 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRLSFVV 9 R+KR FVV Sbjct: 268 RDKRADFVV 276>NP_001129477 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>NP_001129478 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>NP_000810 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>XP_006724053 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>XP_006724052 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>XP_005260998 Length = 1010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>XP_006724051 Length = 1026 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 79 KEKKIEFVV 87>XP_005264997 Length = 227 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRLSFVV 9 R+KR FVV Sbjct: 141 RDKRADFVV 149>XP_005264996 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRLSFVV 9 R+KR FVV Sbjct: 148 RDKRADFVV 156>XP_005264995 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRLSFVV 9 R+KR FVV Sbjct: 275 RDKRADFVV 283>XP_006713079 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRLSFVV 9 R+KR FVV Sbjct: 278 RDKRADFVV 286>XP_006713078 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REKRLSFVV 9 R+KR FVV Sbjct: 285 RDKRADFVV 293>NP_780294 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EK++ FVV Sbjct: 63 KEKKIEFVV 71>NP_004689 Length = 683 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 R+K+LSF+ Sbjct: 156 RKKQLSFI 163>NP_068711 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 R+KRLS+ V Sbjct: 92 RDKRLSYNV 100>NP_000804 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 R+KRLS+ V Sbjct: 92 RDKRLSYNV 100>NP_001005853 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 ++KR+SFV Sbjct: 88 QQKRISFV 95>XP_005247061 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 ++KR+SFV Sbjct: 88 QQKRISFV 95>NP_775486 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 ++KR+SFV Sbjct: 88 QQKRISFV 95>NP_001191355 Length = 613 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 ++KRL+F+ Sbjct: 371 KDKRLNFI 378>NP_001009899 Length = 2245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 REKRLSF 7 R+KRLS+ Sbjct: 1788 RQKRLSY 1794>NP_036385 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KRLSFV 8 KRLSFV Sbjct: 84 KRLSFV 89>NP_001139406 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KRLSFV 8 KRLSFV Sbjct: 28 KRLSFV 33>NP_001139405 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 KRLSFV 8 KRLSFV Sbjct: 78 KRLSFV 83>NP_777577 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+R+SF+ Sbjct: 94 REERVSFL 101>NP_001230208 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+R+SF+ Sbjct: 94 REERVSFL 101>NP_001139373 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRLSFV 8 R+KRLS V Sbjct: 218 RQKRLSHV 225>NP_060297 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REKRLSFV 8 R+KRLS V Sbjct: 216 RQKRLSHV 223>NP_001093122 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 REKRLSF 7 RE+RLS+ Sbjct: 75 RERRLSY 81>NP_001120686 Length = 576 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+R+SF+ Sbjct: 94 REERVSFL 101>NP_002305 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 ++KRL+F+ Sbjct: 405 KDKRLNFI 412>XP_006721229 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+R+SF+ Sbjct: 94 REERVSFL 101>XP_005256350 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 REKRLSFV 8 RE+R+SF+ Sbjct: 94 REERVSFL 101>XP_005247266 Length = 2189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 REKRLSF 7 R+KRLS+ Sbjct: 1732 RQKRLSY 1738>XP_005247265 Length = 2211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 REKRLSF 7 R+KRLS+ Sbjct: 1754 RQKRLSY 1760>NP_001139669 Length = 7081 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 REKRLS 6 REKRLS Sbjct: 1780 REKRLS 1785>NP_653176 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REKRLSFVV 9 +EKRLS V+ Sbjct: 53 QEKRLSNVI 61Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.144 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 508,771 Number of extensions: 702 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |