Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 19 665 NP_002230 17 4312 NP_056475 16 5631 NP_057336 16 7355 NP_001155130 16 7355 NP_001155131 16 7355 NP_001155128 16 7355 NP_001155129 16 7355 NP_001123644 16 7355 NP_001123645 16 7355 NP_005366 16 7355 NP_003348 16 7355 NP_149037 16 7355 NP_001171700 16 7355 XP_006715558 16 7355 XP_006712120 16 7355 XP_005264512 16 7355 XP_005264511 16 7355 XP_006712119 16 7355 XP_005264510 16 7355 XP_006712118 16 7355 XP_005264509 16 7355 XP_005264508 16 7355 XP_006712117 16 7355 XP_005264507 16 7355 XP_005264506 16 7355 NP_116193 16 7355 NP_000651 15 9605 NP_006039 15 9605 NP_001099032 15 9605 NP_003061 15 9605 NP_001276325 15 9605 NP_620614 15 9605 NP_055733 15 9605 NP_000172 15 9605 NP_000422 15 9605 XP_006720498 15 9605 XP_005253941 15 9605 XP_005253940 15 9605 XP_005250354 15 9605 XP_005263479 15 9605 NP_001107657 15 9605>NP_004295 Length = 1620 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 REILLMSTP 9 REILLM TP Sbjct: 373 REILLMPTP 381>NP_002230 Length = 501 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EILLMSTP 9 E+LLMS+P Sbjct: 363 EMLLMSSP 370>NP_056475 Length = 337 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 REILLMSTP 9 REI+++ TP Sbjct: 71 REIVIIDTP 79>NP_057336 Length = 4857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3180 EVLLQATP 3187>NP_001155130 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_001155131 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_001155128 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_001155129 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_001123644 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_001123645 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_005366 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>NP_003348 Length = 91 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EILLMSTP 9 E LLM TP Sbjct: 32 ETLLMDTP 39>NP_149037 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL+ TP Sbjct: 88 ELLLLQTP 95>NP_001171700 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL+ TP Sbjct: 88 ELLLLQTP 95>XP_006715558 Length = 449 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+LLMST Sbjct: 299 ELLLMST 305>XP_006712120 Length = 4812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3135 EVLLQATP 3142>XP_005264512 Length = 4840 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3163 EVLLQATP 3170>XP_005264511 Length = 4847 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3207 EVLLQATP 3214>XP_006712119 Length = 4851 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3174 EVLLQATP 3181>XP_005264510 Length = 4861 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3184 EVLLQATP 3191>XP_006712118 Length = 4864 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3207 EVLLQATP 3214>XP_005264509 Length = 4870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3193 EVLLQATP 3200>XP_005264508 Length = 4875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3198 EVLLQATP 3205>XP_006712117 Length = 4878 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3201 EVLLQATP 3208>XP_005264507 Length = 4880 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3203 EVLLQATP 3210>XP_005264506 Length = 4884 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL +TP Sbjct: 3207 EVLLQATP 3214>NP_116193 Length = 270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 REILLMSTP 9 RE+ L+ TP Sbjct: 243 REVWLLETP 251>NP_000651 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ILLMSTP 9 +LLM+TP Sbjct: 258 LLLMATP 264>NP_006039 Length = 1173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+L+MST Sbjct: 208 EVLMMST 214>NP_001099032 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+L+MST Sbjct: 208 EVLMMST 214>NP_003061 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 REILLMSTP 9 R ILL TP Sbjct: 875 RRILLTGTP 883>NP_001276325 Length = 1590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 REILLMSTP 9 R ILL TP Sbjct: 875 RRILLTGTP 883>NP_620614 Length = 1572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 REILLMSTP 9 R ILL TP Sbjct: 875 RRILLTGTP 883>NP_055733 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 REILLMS 7 REI+LMS Sbjct: 336 REIVLMS 342>NP_000172 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 REILLMSTP 9 R +LL +TP Sbjct: 216 RSVLLYTTP 224>NP_000422 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL+S P Sbjct: 4 EVLLVSAP 11>XP_006720498 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 REILLMS 7 REI+LMS Sbjct: 64 REIVLMS 70>XP_005253941 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL+S P Sbjct: 4 EVLLVSAP 11>XP_005253940 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL+S P Sbjct: 4 EVLLVSAP 11>XP_005250354 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 REILLMSTP 9 R +LL +TP Sbjct: 216 RSVLLYTTP 224>XP_005263479 Length = 1353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EILLMST 8 E+L+MST Sbjct: 208 EVLMMST 214>NP_001107657 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 EILLMSTP 9 E+LL+S P Sbjct: 4 EVLLVSAP 11Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.137 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 478,617 Number of extensions: 711 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |