Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001273575 17 2528 NP_001073900 17 2528 NP_001273577 17 2528 XP_006716668 17 2528 XP_006716667 17 2528 NP_004624 17 4312 NP_003165 17 4312 NP_068506 17 4312 XP_006717559 17 4312 XP_006717558 17 4312 XP_006717557 17 4312 XP_006717556 17 4312 XP_005252630 17 4312 XP_005252629 17 4312 XP_005252628 17 4312 XP_005252627 17 4312 XP_005252626 17 4312 XP_005252625 17 4312 XP_005252624 17 4312 XP_005252623 17 4312 XP_005252622 17 4312 XP_006717555 17 4312 XP_005252621 17 4312 XP_006712799 17 4312 XP_006712798 17 4312 XP_006712797 17 4312 XP_006712796 17 4312 NP_002495 16 5631 NP_667344 16 5631 XP_005257785 16 5631 XP_005251531 16 5631 XP_005251530 16 5631 NP_115510 16 5631 NP_776182 16 7355 NP_056436 16 7355 NP_001018048 15 9605 NP_056001 15 9605 NP_001018047 15 9605 NP_150648 15 9605 NP_001018098 15 9605 NP_060154 15 9605 NP_060550 15 9605 NP_065872 15 9605 NP_055455 15 9605 NP_002194 15 9605 XP_006712937 15 9605 XP_006712936 15 9605 XP_005247034 15 9605>NP_001273575 Length = 808 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 R+ASSTF + Sbjct: 421 RQASSTFSY 429>NP_001073900 Length = 798 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 R+ASSTF + Sbjct: 370 RQASSTFSY 378>NP_001273577 Length = 717 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 R+ASSTF + Sbjct: 370 RQASSTFSY 378>XP_006716668 Length = 656 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 R+ASSTF + Sbjct: 228 RQASSTFSY 236>XP_006716667 Length = 768 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 R+ASSTF + Sbjct: 421 RQASSTFSY 429>NP_004624 Length = 398 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 +EASSTF + Sbjct: 342 KEASSTFSW 350>NP_003165 Length = 1788 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 225 ESSSTFSF 232>NP_068506 Length = 2214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 225 ESSSTFSF 232>XP_006717559 Length = 1866 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_006717558 Length = 1908 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_006717557 Length = 1940 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_006717556 Length = 2024 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_005252630 Length = 2256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 225 ESSSTFSF 232>XP_005252629 Length = 2256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 225 ESSSTFSF 232>XP_005252628 Length = 2256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 225 ESSSTFSF 232>XP_005252627 Length = 2256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 225 ESSSTFSF 232>XP_005252626 Length = 2260 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_005252625 Length = 2277 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_005252624 Length = 2292 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_005252623 Length = 2302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_005252622 Length = 2308 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_006717555 Length = 2328 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 297 ESSSTFSF 304>XP_005252621 Length = 2334 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 EASSTFQF 9 E+SSTF F Sbjct: 303 ESSSTFSF 310>XP_006712799 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 +EASSTF + Sbjct: 367 KEASSTFSW 375>XP_006712798 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 +EASSTF + Sbjct: 257 KEASSTFSW 265>XP_006712797 Length = 398 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 +EASSTF + Sbjct: 342 KEASSTFSW 350>XP_006712796 Length = 402 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 REASSTFQF 9 +EASSTF + Sbjct: 346 KEASSTFSW 354>NP_002495 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EASSTFQ 8 EASST+Q Sbjct: 903 EASSTYQ 909>NP_667344 Length = 1024 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EASSTFQ 8 EASST+Q Sbjct: 903 EASSTYQ 909>XP_005257785 Length = 1887 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSTFQF 9 SSTFQF Sbjct: 330 SSTFQF 335>XP_005251531 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EASSTFQ 8 EASST+Q Sbjct: 904 EASSTYQ 910>XP_005251530 Length = 1121 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EASSTFQ 8 EASST+Q Sbjct: 904 EASSTYQ 910>NP_115510 Length = 1663 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SSTFQF 9 SSTFQF Sbjct: 164 SSTFQF 169>NP_776182 Length = 572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REASSTFQF 9 +EAS TF F Sbjct: 364 KEASITFPF 372>NP_056436 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 REASSTFQ 8 REASST Q Sbjct: 124 REASSTQQ 131>NP_001018048 Length = 3069 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3017 ASSTFQ 3022>NP_056001 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3017 ASSTFQ 3022>NP_001018047 Length = 3135 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 2978 ASSTFQ 2983>NP_150648 Length = 3174 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3017 ASSTFQ 3022>NP_001018098 Length = 3628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3574 ASSTFQ 3579>NP_060154 Length = 3710 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3531 ASSTFQ 3536>NP_060550 Length = 3585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3531 ASSTFQ 3536>NP_065872 Length = 3753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 3574 ASSTFQ 3579>NP_055455 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 1183 ASSTFQ 1188>NP_002194 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 1085 ASSTFQ 1090>XP_006712937 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 1183 ASSTFQ 1188>XP_006712936 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 1183 ASSTFQ 1188>XP_005247034 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ASSTFQ 8 ASSTFQ Sbjct: 1183 ASSTFQ 1188Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.120 0.312 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,959 Number of extensions: 464 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |