Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1482 NP_001185763 18 1482 NP_055459 18 1482 XP_006726412 18 1482 XP_006726410 18 1482 XP_006711760 18 1482 XP_006711719 18 1482 XP_006711718 18 1482 XP_006711717 18 1482 XP_006711716 18 1482 XP_006711715 18 1482 XP_006711714 18 1482 XP_006711713 18 1482 XP_006711712 18 1482 XP_006711711 18 1482 XP_006711710 18 1482 XP_006711709 18 1482 XP_005277503 18 1482 XP_005273038 18 1482 XP_006711708 18 1482 XP_005277500 18 1482 XP_006711707 18 1482 XP_005277499 18 1482 XP_006711706 18 1482 XP_006711705 18 1482 XP_006711164 18 1482 XP_005275915 18 1482 XP_006710140 18 1482 NP_001189358 17 2528 NP_057234 17 2528 XP_006725228 17 2528 XP_005267815 17 2528 NP_001185771 16 5631 NP_006422 16 5631 NP_001008395 16 7355 NP_001243481 15 9605 NP_065100 15 9605 NP_078884 15 9605 NP_001273450 15 9605 NP_001273451 15 9605 NP_001096068 15 9605 NP_001096067 15 9605 NP_001096069 15 9605 NP_001096070 15 9605 XP_006720745 15 9605 XP_005254716 15 9605 XP_006720744 15 9605 XP_006720743 15 9605 XP_006720742 15 9605 XP_006720740 15 9605 XP_005253771 15 9605 XP_006719050 15 9605 XP_005253767 15 9605 XP_005253768 15 9605 XP_005263095 15 9605 XP_005263096 15 9605 XP_005263093 15 9605 XP_005263094 15 9605 NP_006165 15 9605>NP_001185761 Length = 2240 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1827 REALLSSR 1834>NP_001185763 Length = 2362 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1933 REALLSSR 1940>NP_055459 Length = 2346 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1933 REALLSSR 1940>XP_006726412 Length = 140 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 5 REALLSSR 12>XP_006726410 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1674 REALLSSR 1681>XP_006711760 Length = 140 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 5 REALLSSR 12>XP_006711719 Length = 2302 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1889 REALLSSR 1896>XP_006711718 Length = 1436 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 940 REALLSSR 947>XP_006711717 Length = 2385 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1889 REALLSSR 1896>XP_006711716 Length = 2411 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1998 REALLSSR 2005>XP_006711715 Length = 2428 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1932 REALLSSR 1939>XP_006711714 Length = 2429 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1933 REALLSSR 1940>XP_006711713 Length = 2432 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1936 REALLSSR 1943>XP_006711712 Length = 2473 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_006711711 Length = 2482 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1986 REALLSSR 1993>XP_006711710 Length = 2494 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1998 REALLSSR 2005>XP_006711709 Length = 2495 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1999 REALLSSR 2006>XP_005277503 Length = 2498 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_005273038 Length = 2509 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_006711708 Length = 2512 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_005277500 Length = 2525 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_006711707 Length = 2553 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_005277499 Length = 2561 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_006711706 Length = 2591 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2095 REALLSSR 2102>XP_006711705 Length = 2592 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 2096 REALLSSR 2103>XP_006711164 Length = 2087 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 1674 REALLSSR 1681>XP_005275915 Length = 109 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 5 REALLSSR 12>XP_006710140 Length = 290 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 REALLSSR 8 REALLSSR Sbjct: 186 REALLSSR 193>NP_001189358 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 EALLSSRF 9 EALLS+RF Sbjct: 386 EALLSARF 393>NP_057234 Length = 587 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 EALLSSRF 9 EALLS+RF Sbjct: 338 EALLSARF 345>XP_006725228 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 EALLSSRF 9 EALLS+RF Sbjct: 386 EALLSARF 393>XP_005267815 Length = 635 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 EALLSSRF 9 EALLS+RF Sbjct: 386 EALLSARF 393>NP_001185771 Length = 488 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 REALLSS 7 REALLSS Sbjct: 91 REALLSS 97>NP_006422 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 REALLSS 7 REALLSS Sbjct: 138 REALLSS 144>NP_001008395 Length = 333 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 REA L +RF Sbjct: 84 REAALDARF 92>NP_001243481 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 249 EALLDQRF 256>NP_065100 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 239 RDAAYSSRF 247>NP_078884 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 163 EALLDQRF 170>NP_001273450 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 158 RDAAYSSRF 166>NP_001273451 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 158 RDAAYSSRF 166>NP_001096068 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REALLSSR 8 R+ALLS R Sbjct: 141 RDALLSQR 148>NP_001096067 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REALLSSR 8 R+ALLS R Sbjct: 141 RDALLSQR 148>NP_001096069 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REALLSSR 8 R+ALLS R Sbjct: 141 RDALLSQR 148>NP_001096070 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 REALLSSR 8 R+ALLS R Sbjct: 141 RDALLSQR 148>XP_006720745 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 163 EALLDQRF 170>XP_005254716 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 163 EALLDQRF 170>XP_006720744 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 163 EALLDQRF 170>XP_006720743 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 163 EALLDQRF 170>XP_006720742 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 206 EALLDQRF 213>XP_006720740 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EALLSSRF 9 EALL RF Sbjct: 240 EALLDQRF 247>XP_005253771 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 140 RDAAYSSRF 148>XP_006719050 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 140 RDAAYSSRF 148>XP_005253767 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 232 RDAAYSSRF 240>XP_005253768 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 REALLSSRF 9 R+A SSRF Sbjct: 232 RDAAYSSRF 240>XP_005263095 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLSSRF 9 ALLSSR+ Sbjct: 190 ALLSSRY 196>XP_005263096 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLSSRF 9 ALLSSR+ Sbjct: 190 ALLSSRY 196>XP_005263093 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLSSRF 9 ALLSSR+ Sbjct: 190 ALLSSRY 196>XP_005263094 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLSSRF 9 ALLSSR+ Sbjct: 190 ALLSSRY 196>NP_006165 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ALLSSRF 9 ALLSSR+ Sbjct: 190 ALLSSRY 196Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.134 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 297,039 Number of extensions: 353 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |