Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 390 XP_006711527 16 5631 XP_005245411 16 5631 NP_056142 16 7355 NP_002438 16 7355 NP_001231866 16 7355 NP_001272369 16 7355 NP_689969 16 7355 NP_001272368 16 7355 NP_001229743 16 7355 NP_001229742 16 7355 NP_055757 16 7355 NP_001229740 16 7355 NP_001229738 16 7355 XP_006715445 16 7355 XP_005248741 16 7355 XP_005248740 16 7355 XP_006715444 16 7355 XP_005248739 16 7355 XP_005248738 16 7355 XP_005248737 16 7355 XP_005248736 16 7355 XP_005248335 16 7355 XP_006714526 16 7355 XP_005265227 16 7355 XP_006711311 16 7355 XP_005245106 16 7355 NP_001153777 15 9605 NP_079136 15 9605 NP_859074 15 9605 NP_659473 15 9605 NP_004064 15 9605 NP_001186094 15 9605 XP_005257183 15 9605 XP_005257182 15 9605 XP_006721805 15 9605 XP_006721804 15 9605 XP_005257179 15 9605 XP_006721803 15 9605 XP_005257176 15 9605 XP_006721334 15 9605 XP_005273535 15 9605 XP_005273534 15 9605 NP_849150 15 9605 NP_001032402 15 9605>NP_004251 Length = 1208 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 RDTDQALLS 9 RDTDQALL+ Sbjct: 682 RDTDQALLT 690>XP_006711527 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDTDQALL 8 RD+D ALL Sbjct: 210 RDSDDALL 217>XP_005245411 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDTDQALL 8 RD+D ALL Sbjct: 257 RDSDDALL 264>NP_056142 Length = 1016 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTDQALLS 9 DTD+ LLS Sbjct: 750 DTDRPLLS 757>NP_002438 Length = 1400 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDTDQALLS 9 RD D ALL+ Sbjct: 1060 RDLDSALLA 1068>NP_001231866 Length = 1351 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDTDQALLS 9 RD D ALL+ Sbjct: 1011 RDLDSALLA 1019>NP_001272369 Length = 1385 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDTDQALL 8 +DT++ALL Sbjct: 237 KDTEEALL 244>NP_689969 Length = 1708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDTDQALL 8 +DT++ALL Sbjct: 522 KDTEEALL 529>NP_001272368 Length = 1732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDTDQALL 8 +DT++ALL Sbjct: 522 KDTEEALL 529>NP_001229743 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 595 RDTSQAL 601>NP_001229742 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 624 RDTSQAL 630>NP_055757 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 654 RDTSQAL 660>NP_001229740 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 659 RDTSQAL 665>NP_001229738 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 659 RDTSQAL 665>XP_006715445 Length = 696 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 628 RDTSQAL 634>XP_005248741 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 524 RDTSQAL 530>XP_005248740 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 618 RDTSQAL 624>XP_006715444 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 653 RDTSQAL 659>XP_005248739 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 658 RDTSQAL 664>XP_005248738 Length = 727 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 659 RDTSQAL 665>XP_005248737 Length = 747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 679 RDTSQAL 685>XP_005248736 Length = 752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RDT QAL Sbjct: 684 RDTSQAL 690>XP_005248335 Length = 1423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDTDQALL 8 +DT++ALL Sbjct: 237 KDTEEALL 244>XP_006714526 Length = 1670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDTDQALL 8 +DT++ALL Sbjct: 522 KDTEEALL 529>XP_005265227 Length = 1401 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDTDQALLS 9 RD D ALL+ Sbjct: 1061 RDLDSALLA 1069>XP_006711311 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTDQALLS 9 DTD+ LLS Sbjct: 684 DTDRPLLS 691>XP_005245106 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DTDQALLS 9 DTD+ LLS Sbjct: 704 DTDRPLLS 711>NP_001153777 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TDQALLS 9 TDQ LLS Sbjct: 433 TDQGLLS 439>NP_079136 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TDQALLS 9 TDQ LLS Sbjct: 409 TDQGLLS 415>NP_859074 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDTDQALLS 9 R+T QAL S Sbjct: 316 RNTSQALFS 324>NP_659473 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 862 RDNDQAI 868>NP_004064 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TDQALL 8 TDQALL Sbjct: 569 TDQALL 574>NP_001186094 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 862 RDNDQAI 868>XP_005257183 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 454 RDNDQAI 460>XP_005257182 Length = 648 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 555 RDNDQAI 561>XP_006721805 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 863 RDNDQAI 869>XP_006721804 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 815 RDNDQAI 821>XP_005257179 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 820 RDNDQAI 826>XP_006721803 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 863 RDNDQAI 869>XP_005257176 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 863 RDNDQAI 869>XP_006721334 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TDQALLS 9 TDQ LLS Sbjct: 436 TDQGLLS 442>XP_005273535 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDTDQALLS 9 R+T QAL S Sbjct: 140 RNTSQALFS 148>XP_005273534 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDTDQALLS 9 R+T QAL S Sbjct: 303 RNTSQALFS 311>NP_849150 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 DTDQALL 8 DT QALL Sbjct: 670 DTQQALL 676>NP_001032402 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 RDTDQAL 7 RD DQA+ Sbjct: 118 RDNDQAI 124Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.125 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,755 Number of extensions: 760 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |