Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 390 XP_005251512 20 390 NP_037423 18 1935 XP_006716613 18 1935 XP_006716612 18 1935 XP_006716611 18 1935 NP_008930 17 2528 NP_001165276 17 2528 NP_001035374 17 2528 NP_001035375 17 2528 XP_006721308 17 2528 XP_005256150 17 2528 XP_005256149 17 2528 XP_006714501 17 2528 XP_005248291 17 2528 NP_000206 17 4312 XP_006722808 17 4312 XP_005259953 17 4312 NP_001258625 16 5631 NP_001258627 16 5631 NP_004290 16 5631 NP_001258628 16 5631 NP_006109 16 5631 NP_001018238 16 5631 NP_002652 16 5631 NP_001258626 16 5631 NP_006707 16 5631 XP_006715906 16 5631 XP_005250178 16 5631 XP_005250177 16 5631 NP_777360 16 7355 NP_001265237 16 7355 NP_001265235 16 7355 NP_001265236 16 7355 NP_001265234 16 7355 NP_002807 16 7355 NP_542409 16 7355 NP_056250 15 9605 NP_002709 15 9605 NP_001165419 15 9605 NP_076974 15 9605 NP_037512 15 9605 NP_036557 15 9605 NP_001076804 15 9605 NP_001267468 15 9605 NP_904355 15 9605 NP_001165420 15 9605 XP_005260130 15 9605 XP_006722946 15 9605 XP_005252609 15 9605 XP_005250910 15 9605 XP_006713749 15 9605>NP_004963 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RDLNSLFT 8 RDLNSLFT Sbjct: 803 RDLNSLFT 810>XP_005251512 Length = 1132 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 RDLNSLFT 8 RDLNSLFT Sbjct: 803 RDLNSLFT 810>NP_037423 Length = 1443 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDL+ +FTT Sbjct: 702 RDLSGMFTT 710>XP_006716613 Length = 785 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDL+ +FTT Sbjct: 44 RDLSGMFTT 52>XP_006716612 Length = 1365 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDL+ +FTT Sbjct: 624 RDLSGMFTT 632>XP_006716611 Length = 1440 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDL+ +FTT Sbjct: 702 RDLSGMFTT 710>NP_008930 Length = 542 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 141 RDLNEVFT 148>NP_001165276 Length = 541 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 141 RDLNEVFT 148>NP_001035374 Length = 698 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 350 RDLNEVFT 357>NP_001035375 Length = 651 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 350 RDLNEVFT 357>XP_006721308 Length = 666 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 365 RDLNEVFT 372>XP_005256150 Length = 687 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 365 RDLNEVFT 372>XP_005256149 Length = 713 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 365 RDLNEVFT 372>XP_006714501 Length = 425 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 141 RDLNEVFT 148>XP_005248291 Length = 792 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RDLN +FT Sbjct: 391 RDLNEVFT 398>NP_000206 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDLNSL ++ Sbjct: 775 RDLNSLISS 783>XP_006722808 Length = 1124 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDLNSL ++ Sbjct: 775 RDLNSLISS 783>XP_005259953 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 RDLNSLFTT 9 RDLNSL ++ Sbjct: 818 RDLNSLISS 826>NP_001258625 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLNSLFT 8 D+N+LFT Sbjct: 440 DMNTLFT 446>NP_001258627 Length = 726 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLNSLFT 8 D+N+LFT Sbjct: 414 DMNTLFT 420>NP_004290 Length = 753 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLNSLFT 8 D+N+LFT Sbjct: 441 DMNTLFT 447>NP_001258628 Length = 713 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLNSLFT 8 D+N+LFT Sbjct: 401 DMNTLFT 407>NP_006109 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RD NS+F+ Sbjct: 86 RDFNSIFS 93>NP_001018238 Length = 231 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 RDLNSLFT 8 RD NS+F+ Sbjct: 38 RDFNSIFS 45>NP_002652 Length = 1265 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLNSLF 7 RD+NSL+ Sbjct: 747 RDINSLY 753>NP_001258626 Length = 712 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLNSLFT 8 D+N+LFT Sbjct: 400 DMNTLFT 406>NP_006707 Length = 674 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDLNSLFT 8 +DL+S+FT Sbjct: 521 KDLHSIFT 528>XP_006715906 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDLNSLFT 8 +DL+S+FT Sbjct: 297 KDLHSIFT 304>XP_005250178 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDLNSLFT 8 +DL+S+FT Sbjct: 297 KDLHSIFT 304>XP_005250177 Length = 673 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 RDLNSLFT 8 +DL+S+FT Sbjct: 520 KDLHSIFT 527>NP_777360 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDLNSLFTT 9 +DL LFTT Sbjct: 283 KDLLKLFTT 291>NP_001265237 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LNSLFT 8 LNSLFT Sbjct: 143 LNSLFT 148>NP_001265235 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LNSLFT 8 LNSLFT Sbjct: 119 LNSLFT 124>NP_001265236 Length = 153 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LNSLFT 8 LNSLFT Sbjct: 111 LNSLFT 116>NP_001265234 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LNSLFT 8 LNSLFT Sbjct: 143 LNSLFT 148>NP_002807 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 RDLNSLFTT 9 +DL LFTT Sbjct: 303 KDLLKLFTT 311>NP_542409 Length = 185 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LNSLFT 8 LNSLFT Sbjct: 143 LNSLFT 148>NP_056250 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLNSLFTT 9 D NS+F+T Sbjct: 104 DKNSIFST 111>NP_002709 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLNSLF 7 DLNS+F Sbjct: 67 DLNSMF 72>NP_001165419 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLNSLF 7 RDL+S+F Sbjct: 75 RDLDSIF 81>NP_076974 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLNSLF 7 RDL+S+F Sbjct: 75 RDLDSIF 81>NP_037512 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLNSLF 7 DLNS+F Sbjct: 367 DLNSIF 372>NP_036557 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DLNSLFT 8 D+N LFT Sbjct: 32 DVNGLFT 38>NP_001076804 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLNSLF 7 DLNS+F Sbjct: 373 DLNSIF 378>NP_001267468 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLNSLFTT 9 D NS+F+T Sbjct: 104 DKNSIFST 111>NP_904355 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLNSLFTT 9 D NS+F+T Sbjct: 104 DKNSIFST 111>NP_001165420 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLNSLF 7 RDL+S+F Sbjct: 75 RDLDSIF 81>XP_005260130 Length = 104 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLNSLF 7 RDL+S+F Sbjct: 75 RDLDSIF 81>XP_006722946 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 RDLNSLF 7 RDL+S+F Sbjct: 75 RDLDSIF 81>XP_005252609 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DLNSLFT 8 D+N LFT Sbjct: 32 DVNGLFT 38>XP_005250910 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 DLNSLFTT 9 D NS+F+T Sbjct: 104 DKNSIFST 111>XP_006713749 Length = 1150 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DLNSLF 7 DLNS+F Sbjct: 67 DLNSMF 72Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.134 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 452,058 Number of extensions: 842 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |